RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 FNDC11Q9BVV2 318 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 MS4A8Q9BY19 250 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 DPAGT1Q9H3H5 408 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 NT5DC2Q9H857 520 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 REEP1Q9H902 201 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 PELI2Q9HAT8 420 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 LHX9Q9NQ69 397 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 PLCXD1Q9NUJ7 323 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 FBXL12Q9NXK8 326 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 TAS2R9Q9NYW1 312 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 TAAR2Q9P1P5 351 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 FAF1Q9UNN5 650 aaPredicted RBP4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 RNF6Q9Y252 685 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 VDAC3Q9Y277 283 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 CA5BQ9Y2D0 317 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 TPRKBQ9Y3C4 175 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 ORC6Q9Y5N6 252 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 GMPPBQ9Y5P6 360 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 PTPRQQ9UMZ3 2332 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 RELNP78509 3460 aa4.57□□□□□ -1.68
MTHFD1-206ENST00000554353 NBPF19A0A087WUL8 3843 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 A0A1W2PRB8 838 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 TMEM89A2RUT3 159 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 IGLON5A6NGN9 336 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 PPIAL4DF5H284 164 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 WWP2O00308 870 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 PLPP1O14494 284 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 ARPC3O15145 178 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 STX11O75558 287 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 SNRNP200O75643 2136 aaKnown RBP4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 CDC123O75794 336 aaPredicted RBP4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 SEMA3DO95025 777 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 OPN1SWP03999 348 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 IGHV4-34P06331 123 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 IL3P08700 152 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 MYOD1P15172 320 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 UQCRC2P22695 453 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 AQP1P29972 269 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 DRD3P35462 400 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 TGFBR2P37173 567 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 XCR1P46094 333 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 OR1E2P47887 323 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 NANOS2P60321 138 aaKnown RBP4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 SEC61A1P61619 476 aaKnown RBP4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 CDK6Q00534 326 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 REEP5Q00765 189 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 FHL1Q13642 323 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 MICAQ29983 383 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 KIF26BQ2KJY2 2108 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 ZNF630Q2M218 657 aaPredicted RBP4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 UBE2UQ5VVX9 321 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 AGAP6Q5VW22 663 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 SAXO2Q658L1 398 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 ZNF776Q68DI1 518 aaPredicted RBP4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 TMEM225Q6GV28 225 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 PRR27Q6MZM9 219 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 C1orf94Q6P1W5 598 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 TMEM53Q6P2H8 277 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 PNCKQ6P2M8 343 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 NIPAL3Q6P499 406 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 CBLN3Q6UW01 205 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 CD164L2Q6UWJ8 174 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 TMIGD1Q6UXZ0 262 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 PRSS48Q7RTY5 328 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 RNF130Q86XS8 419 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 MMAAQ8IVH4 418 aaKnown RBP4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 DCUN1D3Q8IWE4 304 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 CCDC36Q8IYA8 594 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 PARP8Q8N3A8 854 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 C2orf73Q8N5S3 287 aaPredicted RBP4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 SLC5A8Q8N695 610 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 SLC38A9Q8NBW4 561 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 OR13C9Q8NGT0 318 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 RHOXF1Q8NHV9 184 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 THAP6Q8TBB0 222 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 CXorf40AQ8TE69 158 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 TRUB1Q8WWH5 349 aaKnown RBP4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 LZICQ8WZA0 190 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 TFGQ92734 400 aaPredicted RBP4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 GGHQ92820 318 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 UCN3Q969E3 161 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 BORCS5Q969J3 196 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 PIGTQ969N2 578 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 UBE2E3Q969T4 207 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 RAD51AP1Q96B01 352 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 PPP1R14BQ96C90 147 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 PDXPQ96GD0 296 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 PLEKHA8Q96JA3 519 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 ZNF385AQ96PM9 386 aaKnown RBP4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 RASL10BQ96S79 203 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 APOL4Q9BPW4 351 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 DGCR6LQ9BY27 220 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 AICDAQ9GZX7 198 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 HIPK2Q9H2X6 1198 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 ACOT13Q9NPJ3 140 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 ACER3Q9NUN7 267 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 FAIMQ9NVQ4 179 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 ZNF226Q9NYT6 803 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 SCML1Q9UN30 329 aa4.56□□□□□ -1.68
MTHFD1-206ENST00000554353 FOXJ3Q9UPW0 622 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms