RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ESRRGP62508 458 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 GABPB1Q06547 395 aaPredicted RBP19.62■□□□□ 0.73
TDP1-206ENST00000553569 SPATA46Q5T0L3 261 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 PLBD1Q6P4A8 553 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 CFAP77Q6ZQR2 320 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 ZNF511Q8NB15 262 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 CIB1Q99828 191 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 VRK1Q99986 396 aaPredicted RBP19.62■□□□□ 0.73
TDP1-206ENST00000553569 OR51V1Q9H2C8 321 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 WDR76Q9H967 626 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 S100A14Q9HCY8 104 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 TVP23BQ9NYZ1 205 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 DUSP13Q9UII6 198 aa19.62■□□□□ 0.73
TDP1-206ENST00000553569 A0A1W2PPW3 197 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 ABHD16AO95870 558 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 SPARCP09486 303 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 PSKH1P11801 424 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 NUDT6P53370 316 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 HIST1H3AP68431 136 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 PTGES3Q15185 160 aaKnown RBP19.61■□□□□ 0.73
TDP1-206ENST00000553569 SNAPC1Q16533 368 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 ZSCAN26Q16670 478 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 ELFN2Q5R3F8 820 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 HIST2H3PS2Q5TEC6 136 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 PRSS57Q6UWY2 283 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 HIST2H3AQ71DI3 136 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 C4orf45Q96LM5 186 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 PITX2Q99697 317 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 DOK1Q99704 481 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 HDHD2Q9H0R4 259 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 BARX1Q9HBU1 254 aaPredicted RBP19.61■□□□□ 0.73
TDP1-206ENST00000553569 HINT3Q9NQE9 182 aaKnown RBP19.61■□□□□ 0.73
TDP1-206ENST00000553569 MYEF2Q9P2K5 600 aaKnown RBP19.61■□□□□ 0.73
TDP1-206ENST00000553569 CYB5R1Q9UHQ9 305 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 TMEFF2Q9UIK5 374 aaPredicted RBP19.61■□□□□ 0.73
TDP1-206ENST00000553569 KCNG2Q9UJ96 466 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 GRIP1Q9Y3R0 1128 aa19.61■□□□□ 0.73
TDP1-206ENST00000553569 DBHP09172 617 aa19.6■□□□□ 0.73
TDP1-206ENST00000553569 EPHA2P29317 976 aa19.6■□□□□ 0.73
TDP1-206ENST00000553569 PPOXP50336 477 aa19.6■□□□□ 0.73
TDP1-206ENST00000553569 PPP2R2BQ00005 443 aa19.6■□□□□ 0.73
TDP1-206ENST00000553569 MAD2L1BPQ15013 274 aaPredicted RBP19.6■□□□□ 0.73
TDP1-206ENST00000553569 CPOQ8IVL8 374 aa19.6■□□□□ 0.73
TDP1-206ENST00000553569 PTP4A1Q93096 173 aa19.6■□□□□ 0.73
TDP1-206ENST00000553569 SORCS2Q96PQ0 1159 aa19.6■□□□□ 0.73
TDP1-206ENST00000553569 RIBC2Q9H4K1 309 aa19.6■□□□□ 0.73
TDP1-206ENST00000553569 ELOVL3Q9HB03 270 aa19.6■□□□□ 0.73
TDP1-206ENST00000553569 ANKRD65E5RJM6 399 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 M0R129 80 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 SSX4O60224 188 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 CLPTM1O96005 669 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 NGFP01138 241 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 ALDH3B1P43353 468 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 ENTPD1P49961 510 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 KLF3P57682 345 aaPredicted RBP19.59■□□□□ 0.73
TDP1-206ENST00000553569 PPP1CBP62140 327 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 CLEC12BQ2HXU8 276 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 ALKBH6Q3KRA9 238 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 KLHL12Q53G59 568 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 LINC01590Q5TEZ4 76 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 ARL9Q6T311 187 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 UNQ6126/PRO20091Q6UXV3 157 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 CXXC5Q7LFL8 322 aaKnown RBP19.59■□□□□ 0.73
TDP1-206ENST00000553569 ZCCHC24Q8N2G6 241 aaKnown RBP19.59■□□□□ 0.73
TDP1-206ENST00000553569 BBS1Q8NFJ9 593 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 SYNPRQ8TBG9 265 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 SLC25A40Q8TBP6 338 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 STMN2Q93045 179 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 COQ7Q99807 217 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 RBM4BQ9BQ04 359 aaKnown RBP19.59■□□□□ 0.73
TDP1-206ENST00000553569 OSBPL10Q9BXB5 764 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 PRRG3Q9BZD7 231 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 ENOPH1Q9UHY7 261 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 ATPIF1Q9UII2 106 aa19.59■□□□□ 0.73
TDP1-206ENST00000553569 ZAR1LA6NP61 321 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 M0R233 179 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 LY6HO94772 140 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 GLCEO94923 617 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 ADRA2AP08913 450 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 GSTT1P30711 240 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 EVX1P49640 407 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 BLVRAP53004 296 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 SELENOVP59797 346 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 ERI1Q8IV48 349 aaKnown RBP19.58■□□□□ 0.72
TDP1-206ENST00000553569 ZMYND19Q96E35 227 aaPredicted RBP19.58■□□□□ 0.72
TDP1-206ENST00000553569 MAP6Q96JE9 813 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 ATF6BQ99941 703 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 OR2J1Q9GZK6 312 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 TPK1Q9H3S4 243 aa19.58■□□□□ 0.72
TDP1-206ENST00000553569 ITPR3Q14573 2671 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 TRIM64A6NGJ6 449 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 TRIM64BA6NI03 449 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 ZNF593O00488 134 aaPredicted RBP19.57■□□□□ 0.72
TDP1-206ENST00000553569 EI24O14681 340 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 PRKYO43930 277 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 ZNF250P15622 560 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 MPV17P39210 176 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 RPS7P62081 194 aaKnown RBP19.57■□□□□ 0.72
TDP1-206ENST00000553569 NKPD1Q17RQ9 610 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 SLX4IPQ5VYV7 408 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms