RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 UCHL3P15374 230 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 UGT2B7P16662 529 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 IGFBP3P17936 291 aaPredicted RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 C4BPBP20851 252 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ATP6V1B2P21281 511 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 LOXP28300 417 aaPredicted RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 CRABP2P29373 138 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 GNRHRP30968 328 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 DCTP40126 519 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 OMPP47874 163 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 OR3A2P47893 321 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 SERPINB8P50452 374 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 STC1P52823 247 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 CLDN12P56749 244 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 UNC119Q13432 240 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 AQP6Q13520 282 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 TMEM187Q14656 261 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 CCDC153Q494R4 210 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 FAM120AOSQ5T036 256 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 PWWP2BQ6NUJ5 590 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 MED27Q6P2C8 311 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 LYG2Q86SG7 212 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 MTURNQ8N3F0 131 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 PXT1Q8NFP0 134 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 SYNPRQ8TBG9 265 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 FAM45AQ8TCE6 357 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 PYROXD1Q8WU10 500 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 IL1F10Q8WWZ1 152 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ANKRD9Q96BM1 317 aaPredicted RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 SMIM19Q96E16 107 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 URB1-AS1Q96HZ7 61 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 CEP170P1Q96L14 293 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 HSFY1Q96LI6 401 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ZNF488Q96MN9 340 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 OR8B4Q96RC9 309 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 HBEGFQ99075 208 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 FOXC2Q99958 501 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 QTRT1Q9BXR0 403 aaKnown RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 ARL6Q9H0F7 186 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 DSN1Q9H410 356 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 TMEM27Q9HBJ8 222 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ZDHHC4Q9NPG8 344 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 KRCC1Q9NPI7 259 aaPredicted RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 FBXO8Q9NRD0 319 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 IL17CQ9P0M4 197 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ZNF107Q9UII5 783 aaPredicted RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 PSG11Q9UQ72 335 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 GINS2Q9Y248 185 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 NPATQ14207 1427 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 C9orf84Q5VXU9 1444 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 IQGAP2Q13576 1575 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ALKQ9UM73 1620 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 GJE1A6NN92 205 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 E9PAM4 449 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 NEDD8-MDP1E9PL57 170 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 H7C2Y5 167 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 MRPS12O15235 138 aaKnown RBP3.5□□□□□ -1.85
USP44-208ENST00000552440 BIRC5O15392 142 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 FADS1O60427 444 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 CLDN14O95500 239 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 SNAP29O95721 258 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 IFNA16P05015 189 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 FGF1P05230 155 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 LIPCP11150 499 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 GFAPP14136 432 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 CELP19835 753 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 TBPP20226 339 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 FUT3P21217 361 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 S100A1P23297 94 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 SLCO1A2P46721 670 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 CDK9P50750 372 aaKnown RBP3.5□□□□□ -1.85
USP44-208ENST00000552440 HCCSP53701 268 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 FOXG1P55316 489 aaPredicted RBP3.5□□□□□ -1.85
USP44-208ENST00000552440 HERV-K104P61576 105 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 STXBP1P61764 594 aaKnown RBP3.5□□□□□ -1.85
USP44-208ENST00000552440 TNFRSF9Q07011 255 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 ZNF155Q12901 538 aaPredicted RBP3.5□□□□□ -1.85
USP44-208ENST00000552440 DLG1Q12959 904 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 KRR1Q13601 381 aaKnown RBP3.5□□□□□ -1.85
USP44-208ENST00000552440 PON3Q15166 354 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 PTGES3Q15185 160 aaKnown RBP3.5□□□□□ -1.85
USP44-208ENST00000552440 ODF3L2Q3SX64 289 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 C10orf25Q5T742 122 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 MARC1Q5VT66 337 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 IRAK1BP1Q5VVH5 260 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 SLC18B1Q6NT16 456 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 CD200R1LQ6Q8B3 271 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 CASP12Q6UXS9 341 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 MBOAT2Q6ZWT7 520 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 CEACAM19Q7Z692 300 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 YTHDF3Q7Z739 585 aaKnown RBP3.5□□□□□ -1.85
USP44-208ENST00000552440 FBXO16Q8IX29 292 aaPredicted RBP3.5□□□□□ -1.85
USP44-208ENST00000552440 RIMKLAQ8IXN7 391 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 RBMXL3Q8N7X1 1067 aaKnown RBP3.5□□□□□ -1.85
USP44-208ENST00000552440 OR6F1Q8NGZ6 308 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 RNF138Q8WVD3 245 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 APOBEC4Q8WW27 367 aaKnown RBP3.5□□□□□ -1.85
USP44-208ENST00000552440 KCTD7Q96MP8 289 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 Q96MT0 163 aa3.5□□□□□ -1.85
USP44-208ENST00000552440 OR5B12Q96R08 314 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms