RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 PNKDQ8N490 385 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 ASCC1Q8N9N2 400 aaKnown RBP2.04□□□□□ -2.08
CCDC38-208ENST00000549876 OR51L1Q8NGJ5 315 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 CT45A3Q8NHU0 189 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 CD300LFQ8TDQ1 290 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 TMEM54Q969K7 222 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 TMIGD2Q96BF3 282 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 NAT9Q9BTE0 207 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 SLC7A5P2Q9GIP4 190 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 ING2Q9H160 280 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 PIGUQ9H490 435 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 PLGRKTQ9HBL7 147 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 EML4Q9HC35 981 aaKnown RBP2.04□□□□□ -2.08
CCDC38-208ENST00000549876 CLN6Q9NWW5 311 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 QPCTLQ9NXS2 382 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 XCL2Q9UBD3 114 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 GNPTGQ9UJJ9 305 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 WIF1Q9Y5W5 379 aa2.04□□□□□ -2.08
CCDC38-208ENST00000549876 MSH6P52701 1360 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 UBN2Q6ZU65 1347 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 TRAV39A0A0B4J263 110 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 A0A0B4J2A0 478 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 RBMY1BA6NDE4 496 aaKnown RBP2.03□□□□□ -2.08
CCDC38-208ENST00000549876 RBMY1EA6NEQ0 496 aaKnown RBP2.03□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF726A6NNF4 738 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 HSBP1L1C9JCN9 74 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 C11orf94C9JXX5 98 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 NMT2O60551 498 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 HSBP1O75506 76 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 TACSTD2P09758 323 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 ACSM4P0C7M7 580 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 RBMY1DP0C7P1 496 aaKnown RBP2.03□□□□□ -2.08
CCDC38-208ENST00000549876 RBMY1A1P0DJD3 496 aaKnown RBP2.03□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF250P15622 560 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 CRISP2P16562 243 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 HOXB8P17481 243 aaPredicted RBP2.03□□□□□ -2.08
CCDC38-208ENST00000549876 HOXA9P31269 272 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 NBL1P41271 181 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 VDAC2P45880 294 aaPredicted RBP2.03□□□□□ -2.08
CCDC38-208ENST00000549876 GPR1P46091 355 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 TAS2R19P59542 299 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 STXBP1P61764 594 aaKnown RBP2.03□□□□□ -2.08
CCDC38-208ENST00000549876 YWHAEP62258 255 aaKnown RBP2.03□□□□□ -2.08
CCDC38-208ENST00000549876 ACTA2P62736 377 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 ACTG2P63267 376 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 ACTC1P68032 377 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 SP4Q02446 784 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 ACVR1Q04771 509 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF33AQ06730 810 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 CLINT1Q14677 625 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 VAMP3Q15836 100 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 RPEL1Q2QD12 228 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 DEFB116Q30KQ4 102 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF620Q6ZNG0 422 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 KRTAP13-1Q8IUC0 172 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 MYOCDQ8IZQ8 938 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 ZADH2Q8N4Q0 377 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 HSD17B11Q8NBQ5 300 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 FBXO36Q8NEA4 188 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 OR10R2Q8NGX6 335 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 OR5B3Q8NH48 314 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 OR9G1Q8NH87 305 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 CA5BP1Q8WTZ4 195 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 PIH1D2Q8WWB5 315 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 PIK3IP1Q96FE7 263 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 MED8Q96G25 268 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 CEP170P1Q96L14 293 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 ATP6V1G3Q96LB4 118 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 TSG101Q99816 390 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 OSBPL10Q9BXB5 764 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 TM6SF2Q9BZW4 377 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 DEFB129Q9H1M3 183 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 SLC25A22Q9H936 323 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 RETNQ9HD89 108 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 CD209Q9NNX6 404 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 PRSS16Q9NQE7 514 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 IFNKQ9P0W0 207 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 CLCF1Q9UBD9 225 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 SHPKQ9UHJ6 478 aa2.03□□□□□ -2.08
CCDC38-208ENST00000549876 RCL1Q9Y2P8 373 aaKnown RBP2.03□□□□□ -2.08
CCDC38-208ENST00000549876 PHF3Q92576 2039 aaKnown RBP2.02□□□□□ -2.09
CCDC38-208ENST00000549876 MAP3K19Q56UN5 1328 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 ADGRA3Q8IWK6 1321 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 ZNF816-ZNF321PA0A0X1KG74 233 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 TSPAN11A1L157 253 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 PRSS37A4D1T9 235 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 SLC22A20A6NK97 555 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 CENPXA8MT69 81 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 SLC31A2O15432 143 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 XRCC2O43543 280 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 AQP8O94778 261 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 LSM8O95777 96 aaKnown RBP2.02□□□□□ -2.09
CCDC38-208ENST00000549876 HBE1P02100 147 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 PMCHP20382 165 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 GABRR2P28476 465 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 OR1E1P30953 314 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 FMO3P31513 532 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 SERPINB5P36952 375 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 GPX4P36969 197 aaPredicted RBP2.02□□□□□ -2.09
CCDC38-208ENST00000549876 CFHR2P36980 270 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms