RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 MITD1Q8WV92 249 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 SLC25A44Q96H78 314 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-228ENST00000548938 CMSS1Q9BQ75 279 aaKnown RBP12.33□□□□□ -0.44
HDAC7-228ENST00000548938 FAM60AQ9NP50 221 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 CTSFQ9UBX1 484 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 WIPF3A6NGB9 483 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF208O43345 1280 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 HLA-GP17693 338 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 KCNJ3P48549 501 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 DCDP81605 110 aaKnown RBP12.33□□□□□ -0.44
HDAC7-228ENST00000548938 POMZP3Q6PJE2 187 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF761Q86XN6 746 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-228ENST00000548938 LURAP1LQ8IV03 231 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 CMBLQ96DG6 245 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 UQCC2Q9BRT2 126 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 SELENOIQ9C0D9 397 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 SEMA6CQ9H3T2 930 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 BIN3Q9NQY0 253 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 HRASLS2Q9NWW9 162 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 CARHSP1Q9Y2V2 147 aaKnown RBP12.33□□□□□ -0.44
HDAC7-228ENST00000548938 CCDC85CA6NKD9 419 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 OR5K4A6NMS3 321 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 C2orf74A8MZ97 194 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 LDLRAD4O15165 306 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 IL2RAP01589 272 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 IGFBP3P17936 291 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-228ENST00000548938 NFATC4Q14934 902 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 TEX30Q5JUR7 227 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 C10orf91Q5T1B1 145 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 TMPPEQ6ZT21 453 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 TAF8Q7Z7C8 310 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF440Q8IYI8 595 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 ZFP82Q8N141 532 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 ADAD2Q8NCV1 583 aaKnown RBP12.32□□□□□ -0.44
HDAC7-228ENST00000548938 TMED6Q8WW62 240 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 ARL11Q969Q4 196 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 FOXRED1Q96CU9 486 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF587Q96SQ5 575 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-228ENST00000548938 PHB2Q99623 299 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 PRRT1Q99946 306 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 NUDT9Q9BW91 350 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 OR10A5Q9H207 317 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 MRPL22Q9NWU5 206 aaKnown RBP12.32□□□□□ -0.44
HDAC7-228ENST00000548938 A0A0B4J2A0 478 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 A0A0J9YY10 115 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 CD2P06729 351 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 MAOAP21397 527 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 TACR3P29371 465 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 MEOX2P50222 304 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 MEF2DQ14814 521 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 ALG11Q2TAA5 492 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 FNDC7Q5VTL7 733 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 C1QL3Q5VWW1 255 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 MED25Q71SY5 747 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 FJX1Q86VR8 437 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 PAQR4Q8N4S7 273 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-228ENST00000548938 OR1M1Q8NGA1 313 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 OR4K17Q8NGC6 315 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 STOML3Q8TAV4 291 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 DCUN1D4Q92564 292 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 ZC3H10Q96K80 434 aaKnown RBP12.32□□□□□ -0.44
HDAC7-228ENST00000548938 WDR92Q96MX6 357 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 DGAT2Q96PD7 388 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 TREM1Q9NP99 234 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 SHPKQ9UHJ6 478 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 CSAG2Q9Y5P2 127 aa12.32□□□□□ -0.44
HDAC7-228ENST00000548938 OR2T1O43869 369 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 LMX1BO60663 402 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 STK17BO94768 372 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 CRYBA1P05813 215 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 HPGDP15428 266 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 PPICP45877 212 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.31□□□□□ -0.441e-6■■■□□ 16.9
HDAC7-228ENST00000548938 SLC18B1Q6NT16 456 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 TRAPPC6BQ86SZ2 158 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 OR4D6Q8NGJ1 314 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 ELP5Q8TE02 316 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 NUDCD2Q8WVJ2 157 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 RELTQ969Z4 430 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 CHMP1AQ9HD42 196 aaPredicted RBP12.31□□□□□ -0.44
HDAC7-228ENST00000548938 CLDN16Q9Y5I7 305 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 C13orf42A0A1B0GVH6 325 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 PQLC2LA1A4F0 135 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 C5orf51A6NDU8 294 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 C17orf51A8MQB3 221 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 F8VVB4 439 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 F8VWA3 439 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 XKRYO14609 159 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 CRHP06850 196 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 CD79AP11912 226 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 TPT1P13693 172 aaKnown RBP12.31□□□□□ -0.44
HDAC7-228ENST00000548938 AKR1C4P17516 323 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 NFYBP25208 207 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 TDHQ8IZJ6 230 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF563Q8TA94 476 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 GLYATL2Q8WU03 294 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 CCNL2Q96S94 520 aaPredicted RBP12.31□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF576Q9H609 170 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 TMEM100Q9NV29 134 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms