RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 SLAMF6Q96DU3 332 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 UTP23Q9BRU9 249 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 NPDC1Q9NQX5 325 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 FAM206AQ9NX38 181 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 LOC102723996A0A087X1L8 192 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 UMODP07911 640 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 CYC1P08574 325 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 PGA4P0DJD7 388 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 PGA3P0DJD8 388 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 MMP16P51512 607 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 GPAT4Q86UL3 456 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 OR10H5Q8NGA6 315 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 GPR137Q96N19 417 aa16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 ZNF436Q9C0F3 470 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-208ENST00000548436 YKT6O15498 198 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 TRAF3IP2O43734 574 aaPredicted RBP16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 RAMP1O60894 148 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 TSC22D2O75157 780 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 CCL4P13236 92 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 KLK2P20151 261 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 LAP3P28838 519 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 SFTPDP35247 375 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 CLRN1P58418 232 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 MFAP5Q13361 173 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 THEM4Q5T1C6 240 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 TMEM244Q5VVB8 128 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 NLRC3Q7RTR2 1065 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 ADPRHL1Q8NDY3 354 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 OR4K17Q8NGC6 315 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 METTL17Q9H7H0 456 aaPredicted RBP16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 GPN3Q9UHW5 284 aaPredicted RBP16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 IGHV1-45A0A0A0MS14 117 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 TEX51A0A1B0GUA7 166 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 A0A1W2PPL8 197 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 G3V3Q6 166 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 ERVH48-1M5A8F1 160 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 NTN3O00634 580 aaPredicted RBP16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 FCER2P06734 321 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 ACSM4P0C7M7 580 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 UBCP0CG48 685 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 PRSS3P35030 304 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 MECP2P51608 486 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 CSRP2Q16527 193 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 LYPD6Q86Y78 171 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 NOXO1Q8NFA2 376 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 OR6M1Q8NGM8 313 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 GAL3ST1Q99999 423 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 PTTG3PQ9NZH4 202 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 MYEF2Q9P2K5 600 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 SCP2D1Q9UJQ7 156 aa16.49■□□□□ 0.23
PRPF40B-208ENST00000548436 PYCARD-AS1I3L0S3 204 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 TTRP02766 147 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 CSF1P09603 554 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 DNASE1P24855 282 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 TMEM176BQ3YBM2 270 aaPredicted RBP16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 FAM198BQ6UWH4 519 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 ZNF782Q6ZMW2 699 aaPredicted RBP16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 CFAP77Q6ZQR2 320 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 JAGN1Q8N5M9 183 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 MR1Q95460 341 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 C1orf198Q9H425 327 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 TAS2R8Q9NYW2 309 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 PISDQ9UG56 409 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 NXT1Q9UKK6 140 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 PTRH2Q9Y3E5 179 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 RHBDD3Q9Y3P4 386 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 LHFPL6Q9Y693 200 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 MUC3AQ02505 3323 aa16.48■□□□□ 0.23
PRPF40B-208ENST00000548436 LOC390937A0A1W2PQ73 354 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 MEGF11A6BM72 1044 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 LDLRAD4O15165 306 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 KLF7O75840 302 aaPredicted RBP16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 ALX3O95076 343 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 IGHG1P01857 330 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 GTF2F2P13984 249 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 CDAP32320 146 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 FAUP35544 74 aaKnown RBP16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 GPR85P60893 370 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 TOMM20Q15388 145 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 PEAR1Q5VY43 1037 aaPredicted RBP16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 CARD17Q5XLA6 110 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 OR10K2Q6IF99 312 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 ZNF767PQ75MW2 155 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 MAML2Q8IZL2 1156 aaPredicted RBP16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 GPX8Q8TED1 209 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 FGGYQ96C11 551 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 IMMP1LQ96LU5 166 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 SEC61A2Q9H9S3 476 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 TP53I11O14683 189 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 KLK3P07288 261 aaPredicted RBP16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 COX6A1P12074 109 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 HYAL4Q2M3T9 481 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 LGALSLQ3ZCW2 172 aaPredicted RBP16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 C1orf100Q5SVJ3 147 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 AGBL5Q8NDL9 886 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 OR4D6Q8NGJ1 314 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 MED30Q96HR3 178 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 PBOV1Q9GZY1 135 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 PTGES2Q9H7Z7 377 aa16.47■□□□□ 0.23
PRPF40B-208ENST00000548436 ZNF69Q9UC07 566 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms