RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 ERFP50548 548 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 BLVRAP53004 296 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 PPP2R2BQ00005 443 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 ELFN2Q5R3F8 820 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 OTPQ5XKR4 325 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 RGS7BPQ6MZT1 257 aaPredicted RBP9.36□□□□□ -0.91
GCN1-202ENST00000547263 CFAP77Q6ZQR2 320 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 BIVMQ86UB2 503 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 HIPK1Q86Z02 1210 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 GJC3Q8NFK1 279 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 OR1F12Q8NHA8 337 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 TEX47Q8TBZ9 253 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 C10orf105Q8TEF2 133 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 MAP6Q96JE9 813 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 MS4A5Q9H3V2 200 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 NKIRAS2Q9NYR9 191 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 PLEK2Q9NYT0 353 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 TMEFF2Q9UIK5 374 aaPredicted RBP9.36□□□□□ -0.91
GCN1-202ENST00000547263 COMMD3-BMI1R4GMX3 469 aa9.36□□□□□ -0.91
GCN1-202ENST00000547263 MAP1AP78559 2803 aaPredicted RBP9.36□□□□□ -0.91
GCN1-202ENST00000547263 IGHV4-30-2A0A087WSY4 118 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 A0A1B0GWJ7 208 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 C5orf49A4QMS7 147 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 H7C1Q1 480 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 M0R233 179 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 NDUFS8O00217 210 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 SSX4O60224 188 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 E2F6O75461 281 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 IFNGP01579 166 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 CLUP10909 449 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 ZNF3P17036 446 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 SLC2A5P22732 501 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 PYCR1P32322 319 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 MMP15P51511 669 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 ARHGDIAP52565 204 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 NUDT6P53370 316 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 ESRRGP62508 458 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 MRPS11P82912 194 aaKnown RBP9.35□□□□□ -0.91
GCN1-202ENST00000547263 GINS1Q14691 196 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 LYPD4Q6UWN0 246 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 UNQ6126/PRO20091Q6UXV3 157 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 RHOUQ7L0Q8 258 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 TIGD4Q8IY51 512 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 ZNF786Q8N393 782 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 IQCF1Q8N6M8 205 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 ZNF525Q8N782 197 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 OR1J1Q8NGS3 322 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 SYNPRQ8TBG9 265 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 SLC25A40Q8TBP6 338 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 KLF14Q8TD94 323 aaPredicted RBP9.35□□□□□ -0.91
GCN1-202ENST00000547263 LRTOMTQ8WZ04 291 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 CENPNQ96H22 339 aaPredicted RBP9.35□□□□□ -0.91
GCN1-202ENST00000547263 OSBPL10Q9BXB5 764 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 ZNF556Q9HAH1 456 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 ELOVL3Q9HB03 270 aa9.35□□□□□ -0.91
GCN1-202ENST00000547263 CGGBP1Q9UFW8 167 aaPredicted RBP9.35□□□□□ -0.91
GCN1-202ENST00000547263 ZAR1LA6NP61 321 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 C17orf100A8MU93 164 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 FAM171A2A8MVW0 826 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 H3BN98 237 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 PRODHO43272 600 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 LY6HO94772 140 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 GLCEO94923 617 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 CLPTM1O96005 669 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 HMGN1P05114 100 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 SLC25A16P16260 332 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 KITLGP21583 273 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 MPV17P39210 176 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 HTR5AP47898 357 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 RGS6P49758 472 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 CRISP1P54107 249 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 KLF3P57682 345 aaPredicted RBP9.34□□□□□ -0.91
GCN1-202ENST00000547263 PPP1CBP62140 327 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 LOXL1Q08397 574 aaPredicted RBP9.34□□□□□ -0.91
GCN1-202ENST00000547263 ECH1Q13011 328 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 RIN1Q13671 783 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 KPNB1Q14974 876 aaKnown RBP9.34□□□□□ -0.91
GCN1-202ENST00000547263 ZNF718Q3SXZ3 478 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 ZFP1Q6P2D0 407 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 FBXW12Q6X9E4 464 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 AMIGO2Q86SJ2 522 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 ZCCHC24Q8N2G6 241 aaKnown RBP9.34□□□□□ -0.91
GCN1-202ENST00000547263 ATG16L2Q8NAA4 619 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 OR9Q1Q8NGQ5 310 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 ST7LQ8TDW4 575 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 SLC7A6Q92536 515 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 COG8Q96MW5 612 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 SYT3Q9BQG1 590 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 C1QTNF5Q9BXJ0 243 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 REG4Q9BYZ8 158 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 OR2J1Q9GZK6 312 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 RAB1BQ9H0U4 201 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 RERGLQ9H628 205 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 WDR76Q9H967 626 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 HINT3Q9NQE9 182 aaKnown RBP9.34□□□□□ -0.91
GCN1-202ENST00000547263 PAPOLBQ9NRJ5 636 aaKnown RBP9.34□□□□□ -0.91
GCN1-202ENST00000547263 SLCO1C1Q9NYB5 712 aa9.34□□□□□ -0.91
GCN1-202ENST00000547263 EIF3KQ9UBQ5 218 aaKnown RBP9.34□□□□□ -0.91
GCN1-202ENST00000547263 LOC390937A0A1W2PQ73 354 aa9.33□□□□□ -0.92
GCN1-202ENST00000547263 FAM183AA6NL82 134 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms