RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 UQCRBP14927 111 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 AK4P27144 223 aaPredicted RBP2.32□□□□□ -2.04
SNHG1-224ENST00000545688 TEAD1P28347 426 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 CA7P43166 264 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 BDKRB1P46663 353 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 NRF1Q16656 503 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 ADPRMQ3LIE5 342 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 C6orf120Q7Z4R8 191 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 CYB561D1Q8N8Q1 229 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 UBA3Q8TBC4 463 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 SLC37A2Q8TED4 501 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 GIMAP1Q8WWP7 306 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 SELENOMQ8WWX9 145 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 NT5C3BQ969T7 300 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 C9orf72Q96LT7 481 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 TSG101Q99816 390 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 SMR3AQ99954 134 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 ULBP3Q9BZM4 244 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 TMEM231Q9H6L2 316 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 UCK1Q9HA47 277 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 AGPAT4Q9NRZ5 378 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 ARGLU1Q9NWB6 273 aaPredicted RBP2.32□□□□□ -2.04
SNHG1-224ENST00000545688 MRPL39Q9NYK5 338 aaKnown RBP2.32□□□□□ -2.04
SNHG1-224ENST00000545688 CNOT2Q9NZN8 540 aaKnown RBP2.32□□□□□ -2.04
SNHG1-224ENST00000545688 OPN4Q9UHM6 478 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 KIF25Q9UIL4 384 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 KIAA1257Q9ULG3 409 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 FARSAQ9Y285 508 aaKnown RBP2.32□□□□□ -2.04
SNHG1-224ENST00000545688 MGAM2Q2M2H8 2515 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 NOTCH1P46531 2555 aa2.32□□□□□ -2.04
SNHG1-224ENST00000545688 BIRC6Q9NR09 4857 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 MEGF8Q7Z7M0 2845 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 KLF7O75840 302 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-224ENST00000545688 PNPP00491 289 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 APOEP02649 317 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 UGT2B4P06133 528 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 IVLP07476 585 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 RHOCP08134 193 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 CHTF8P0CG12 524 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 SLC2A3P11169 496 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 ZNF14P17017 642 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-224ENST00000545688 NELFEP18615 380 aaKnown RBP2.31□□□□□ -2.04
SNHG1-224ENST00000545688 CCR1P32246 355 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 GTF2H1P32780 548 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 RORAP35398 523 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 GCLMP48507 274 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 GFERP55789 205 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 UBE2IP63279 158 aaKnown RBP2.31□□□□□ -2.04
SNHG1-224ENST00000545688 TFF3Q07654 80 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 ACTN3Q08043 901 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-224ENST00000545688 GOLGA7BQ2TAP0 167 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 PYCR3Q53H96 274 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 C5orf47Q569G3 176 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 Q5W150 140 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 ETFRF1Q6IPR1 90 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 WASH2PQ6VEQ5 465 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 Q6ZPB1 254 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-224ENST00000545688 KRTAP13-1Q8IUC0 172 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 CCDC65Q8IXS2 484 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 C6orf223Q8N319 242 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 ATP6V0D2Q8N8Y2 350 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 OR10G6Q8NH81 332 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 ECHDC3Q96DC8 303 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 CABS1Q96KC9 395 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 RPRD1AQ96P16 312 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-224ENST00000545688 SPIN2AQ99865 258 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 SPIN2BQ9BPZ2 258 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 ZNF2Q9BSG1 426 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-224ENST00000545688 GSDMCQ9BYG8 508 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 RAB33BQ9H082 229 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 THAP9Q9H5L6 903 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 VANGL2Q9ULK5 521 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 TRAF3IP3Q9Y228 551 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 PCYT1BQ9Y5K3 369 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-224ENST00000545688 WIF1Q9Y5W5 379 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 AP4B1Q9Y6B7 739 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 CLCA3PQ9Y6N3 262 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 TRRAPQ9Y4A5 3859 aa2.31□□□□□ -2.04
SNHG1-224ENST00000545688 CHD5Q8TDI0 1954 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 PHF3Q92576 2039 aaKnown RBP2.3□□□□□ -2.04
SNHG1-224ENST00000545688 SPTBP11277 2137 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 INTS1Q8N201 2190 aaKnown RBP2.3□□□□□ -2.04
SNHG1-224ENST00000545688 PVALEFA0A1B0GWK0 134 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 KLRC4O43908 158 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 KLHL41O60662 606 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 ADCY5O95622 1261 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 SOD1P00441 154 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 PAEPP09466 180 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 CLUP10909 449 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 FOLR1P15328 257 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 UQCRC2P22695 453 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 CASP14P31944 242 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 TAS2R19P59542 299 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 ACTA2P62736 377 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 RPS15P62841 145 aaKnown RBP2.3□□□□□ -2.04
SNHG1-224ENST00000545688 ACTC1P68032 377 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 GNA12Q03113 381 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 ELP6Q0PNE2 266 aa2.3□□□□□ -2.04
SNHG1-224ENST00000545688 CUL2Q13617 745 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms