RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 MEGF10Q96KG7 1140 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 COG8Q96MW5 612 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 OR8B2Q96RD0 313 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 OR52B2Q96RD2 323 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 ALG12Q9BV10 488 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 CDADC1Q9BWV3 514 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 TXNIPQ9H3M7 391 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 CLN8Q9UBY8 286 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 SLC7A7Q9UM01 511 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 CPSF4LA6NMK7 179 aaKnown RBP12.21□□□□□ -0.45
RTN3-214ENST00000545432 ZNF879B4DU55 563 aa12.21□□□□□ -0.45
RTN3-214ENST00000545432 J3QW42 95 aa12.21□□□□□ -0.45
RTN3-214ENST00000545432 M0QX08 132 aa12.21□□□□□ -0.45
RTN3-214ENST00000545432 ENSAO43768 121 aaKnown RBP12.21□□□□□ -0.45
RTN3-214ENST00000545432 OR7A10O76100 309 aa12.21□□□□□ -0.45
RTN3-214ENST00000545432 ABHD16AO95870 558 aa12.21□□□□□ -0.45
RTN3-214ENST00000545432 AQP2P41181 271 aa12.21□□□□□ -0.45
RTN3-214ENST00000545432 TTMPQ5BVD1 217 aa12.21□□□□□ -0.45
RTN3-214ENST00000545432 PAGE3Q5JUK9 113 aa12.21□□□□□ -0.45
RTN3-214ENST00000545432 BLOC1S3Q6QNY0 202 aa12.21□□□□□ -0.45
RTN3-214ENST00000545432 NLRC3Q7RTR2 1065 aa12.21□□□□□ -0.45
RTN3-214ENST00000545432 ZNF420Q8TAQ5 688 aaPredicted RBP12.21□□□□□ -0.45
RTN3-214ENST00000545432 ACOXLQ9NUZ1 547 aa12.21□□□□□ -0.45
RTN3-214ENST00000545432 ZNF205O95201 554 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 CYB5R3P00387 301 aaPredicted RBP12.2□□□□□ -0.46
RTN3-214ENST00000545432 SCG5P05408 212 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 UMPSP11172 480 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 CD247P20963 164 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 AQP1P29972 269 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 GATA4P43694 442 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 ERFP50548 548 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 LYPD2Q6UXB3 125 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 FBXW12Q6X9E4 464 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 GDPGP1Q6ZNW5 385 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 DCDC5Q6ZRR9 648 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 PCYOX1LQ8NBM8 494 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 OR8G5Q8NG78 346 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 MOSPD2Q8NHP6 518 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 LRRC8CQ8TDW0 803 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 GATAD2BQ8WXI9 593 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 NSMAFQ92636 917 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 TRIM15Q9C019 465 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 CORO2BQ9UQ03 480 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 PLXNB1O43157 2135 aa12.2□□□□□ -0.46
RTN3-214ENST00000545432 IGHV1-69DA0A0B4J2H0 117 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 KPNA4O00629 521 aaPredicted RBP12.19□□□□□ -0.46
RTN3-214ENST00000545432 IGHV1-69P01742 117 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 IGHV4-59P01825 116 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 SFTPBP07988 381 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 CSF1P09603 554 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 MSR1P21757 451 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 FUT4P22083 530 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 RBM34P42696 430 aaKnown RBP12.19□□□□□ -0.46
RTN3-214ENST00000545432 SRP9P49458 86 aaKnown RBP12.19□□□□□ -0.46
RTN3-214ENST00000545432 NPY4RP50391 375 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 WDR4P57081 412 aaKnown RBP12.19□□□□□ -0.46
RTN3-214ENST00000545432 GUCY1A3Q02108 690 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 LAPTM4AQ15012 233 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 DLEU7Q6UYE1 221 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 C1orf87Q8N0U7 546 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 OR13G1Q8NGZ3 307 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 Q8TCH9 128 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 AENQ8WTP8 325 aaKnown RBP12.19□□□□□ -0.46
RTN3-214ENST00000545432 RBP7Q96R05 134 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 POLE4Q9NR33 117 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 ANGPT4Q9Y264 503 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 HIF3AQ9Y2N7 669 aa12.19□□□□□ -0.46
RTN3-214ENST00000545432 C12orf71A8MTZ7 269 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 GPR37O15354 613 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 MLNRO43193 412 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 KITP10721 976 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 CD47Q08722 323 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 C11orf91Q3C1V1 193 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 RUNDC3AQ59EK9 446 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 FAM201AQ5SY85 155 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 CD276Q5ZPR3 534 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 VASH1Q7L8A9 365 aaPredicted RBP12.18□□□□□ -0.46
RTN3-214ENST00000545432 NKAIN4Q8IVV8 208 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 SLC30A8Q8IWU4 369 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 CELF2-AS1Q8N7Q2 184 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 ATG16L2Q8NAA4 619 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 LRRC75AQ8NAA5 344 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 ERGIC1Q969X5 290 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 PPP1R14AQ96A00 147 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 SGTBQ96EQ0 304 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 WDFY2Q96P53 400 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 CPPED1Q9BRF8 314 aaPredicted RBP12.18□□□□□ -0.46
RTN3-214ENST00000545432 SIRPDQ9H106 197 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 C20orf141Q9NUB4 165 aa12.18□□□□□ -0.46
RTN3-214ENST00000545432 LRRC30A6NM36 301 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 EVPLLA8MZ36 301 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 RGS16O15492 202 aaPredicted RBP12.17□□□□□ -0.46
RTN3-214ENST00000545432 TOX4O94842 621 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 LOXL3P58215 753 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 RPL27P61353 136 aaKnown RBP12.17□□□□□ -0.46
RTN3-214ENST00000545432 COX10Q12887 443 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 CLDN22Q8N7P3 220 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 C11orf65Q8NCR3 313 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 PFN4Q8NHR9 129 aa12.17□□□□□ -0.46
RTN3-214ENST00000545432 SPDL1Q96EA4 605 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms