RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 SMAP2Q8WU79 429 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-210ENST00000545368 MRPL48Q96GC5 212 aaKnown RBP11.31□□□□□ -0.6
CDCA3-210ENST00000545368 TBX5Q99593 518 aa11.31□□□□□ -0.6
CDCA3-210ENST00000545368 COQ7Q99807 217 aa11.31□□□□□ -0.6
CDCA3-210ENST00000545368 ATF6BQ99941 703 aa11.31□□□□□ -0.6
CDCA3-210ENST00000545368 SPOCK3Q9BQ16 436 aa11.31□□□□□ -0.6
CDCA3-210ENST00000545368 COPS4Q9BT78 406 aa11.31□□□□□ -0.6
CDCA3-210ENST00000545368 ABHD6Q9BV23 337 aa11.31□□□□□ -0.6
CDCA3-210ENST00000545368 ESRP2Q9H6T0 727 aaKnown RBP11.31□□□□□ -0.6
CDCA3-210ENST00000545368 MRPS18AQ9NVS2 196 aaKnown RBP11.31□□□□□ -0.6
CDCA3-210ENST00000545368 NPAP1Q9NZP6 1156 aa11.31□□□□□ -0.6
CDCA3-210ENST00000545368 ATPIF1Q9UII2 106 aa11.31□□□□□ -0.6
CDCA3-210ENST00000545368 COPS3Q9UNS2 423 aa11.31□□□□□ -0.6
CDCA3-210ENST00000545368 EXOGQ9Y2C4 368 aaKnown RBP11.31□□□□□ -0.6
CDCA3-210ENST00000545368 LRRC42Q9Y546 428 aa11.31□□□□□ -0.6
CDCA3-210ENST00000545368 IGHV1-18A0A0C4DH31 117 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 DAPL1A0PJW8 107 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 OR6C6A6NF89 314 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 IGLV1-44P01699 117 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 CELA3BP08861 270 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 CECR9P0C854 216 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 COX6B1P14854 86 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 ALOX5APP20292 161 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 PTAFRP25105 342 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 STOMP27105 288 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 APEX1P27695 318 aaKnown RBP11.3□□□□□ -0.6
CDCA3-210ENST00000545368 HSD11B1P28845 292 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 SLC15A1P46059 708 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 GDI2P50395 445 aaKnown RBP11.3□□□□□ -0.6
CDCA3-210ENST00000545368 HCCSP53701 268 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 NR1H2P55055 460 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 GRB2P62993 217 aaKnown RBP11.3□□□□□ -0.6
CDCA3-210ENST00000545368 SEZ6L2Q6UXD5 910 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 AHSA2Q719I0 299 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 KRT77Q7Z794 578 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 STX19Q8N4C7 294 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 SLC30A7Q8NEW0 376 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 IL17RDQ8NFM7 739 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 OR52I1Q8NGK6 324 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 MYDGFQ969H8 173 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 MAP6Q96JE9 813 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 ZNF75AQ96N20 296 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 CDH20Q9HBT6 801 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 INPP5EQ9NRR6 644 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 CENPMQ9NSP4 180 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 KCNN3Q9UGI6 736 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 PSORS1C1Q9UIG5 152 aa11.3□□□□□ -0.6
CDCA3-210ENST00000545368 TENM4Q6N022 2769 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 A0A1W2PQL4 384 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-210ENST00000545368 SYNGR3O43761 229 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 GOSR1O95249 250 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 CRYAAP02489 173 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 H2BFMP0C1H6 154 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 MYL12AP19105 171 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 CD40P25942 277 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 DCKP27707 260 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 EGR3Q06889 387 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 SP5Q6BEB4 398 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-210ENST00000545368 ZNF322Q6U7Q0 402 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-210ENST00000545368 SPATC1Q76KD6 591 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 RHOUQ7L0Q8 258 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-210ENST00000545368 ZNF584Q8IVC4 421 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 ACBD7Q8N6N7 88 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 ACBD4Q8NC06 268 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 CPEB3Q8NE35 698 aaKnown RBP11.29□□□□□ -0.6
CDCA3-210ENST00000545368 OR10S1Q8NGN2 331 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 SNX33Q8WV41 574 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 RNF133Q8WVZ7 376 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 IPCEF1Q8WWN9 437 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-210ENST00000545368 GGHQ92820 318 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 SPTSSAQ969W0 71 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 PLPPR2Q96GM1 343 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 TMEM80Q96HE8 168 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 MS4A3Q96HJ5 214 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 MROQ9BYG7 248 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 TTTY10Q9BZA0 68 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 FGF20Q9NP95 211 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-210ENST00000545368 PNRC2Q9NPJ4 139 aaKnown RBP11.29□□□□□ -0.6
CDCA3-210ENST00000545368 DDX28Q9NUL7 540 aaKnown RBP11.29□□□□□ -0.6
CDCA3-210ENST00000545368 CHCHD3Q9NX63 227 aaKnown RBP11.29□□□□□ -0.6
CDCA3-210ENST00000545368 UBAP1Q9NZ09 502 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 IKZF2Q9UKS7 526 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 LRCH1Q9Y2L9 728 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 KLHDC2Q9Y2U9 406 aa11.29□□□□□ -0.6
CDCA3-210ENST00000545368 GCN1Q92616 2671 aaKnown RBP11.28□□□□□ -0.6
CDCA3-210ENST00000545368 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.28□□□□□ -0.6
CDCA3-210ENST00000545368 C5orf49A4QMS7 147 aa11.28□□□□□ -0.6
CDCA3-210ENST00000545368 PTGES3LE9PB15 166 aa11.28□□□□□ -0.6
CDCA3-210ENST00000545368 J3QRE1 110 aa11.28□□□□□ -0.6
CDCA3-210ENST00000545368 ZNF254O75437 659 aa11.28□□□□□ -0.6
CDCA3-210ENST00000545368 IGHA1P01876 353 aa11.28□□□□□ -0.6
CDCA3-210ENST00000545368 APOC1P02654 83 aa11.28□□□□□ -0.6
CDCA3-210ENST00000545368 KRT8P05787 483 aa11.28□□□□□ -0.6
CDCA3-210ENST00000545368 CD3EP07766 207 aa11.28□□□□□ -0.6
CDCA3-210ENST00000545368 CCNOP22674 350 aa11.28□□□□□ -0.6
CDCA3-210ENST00000545368 CRHBPP24387 322 aa11.28□□□□□ -0.6
CDCA3-210ENST00000545368 EEF1B2P24534 225 aaKnown RBP11.28□□□□□ -0.6
CDCA3-210ENST00000545368 OPRL1P41146 370 aa11.28□□□□□ -0.6
CDCA3-210ENST00000545368 ACTA2P62736 377 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms