RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 MAP6Q96JE9 813 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 HDHD2Q9H0R4 259 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 HAO2Q9NYQ3 351 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 LAMP5Q9UJQ1 280 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 HSPE1-MOB4S4R3N1 261 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 IGHV2OR16-5A0A0B4J2B6 119 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 FAM221AA4D161 298 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SYNGR3O43761 229 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 COX5BP10606 129 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CALCRP30988 508 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 MTNR1AP48039 350 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 NUDT6P53370 316 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ISL1P61371 349 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 POU4F2Q12837 409 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 TAF13Q15543 124 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SPATC1Q76KD6 591 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 OTOSQ8NHW6 89 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 APH1BQ8WW43 257 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 RNFT2Q96EX2 444 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ATF6BQ99941 703 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 YIPF3Q9GZM5 350 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 RASSF4Q9H2L5 321 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ADGRL4Q9HBW9 690 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CENPMQ9NSP4 180 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ATP23Q9Y6H3 246 aa12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 UTP20O75691 2785 aaKnown RBP12.55□□□□□ -0.4
TNFRSF1A-216ENST00000543995 APOL3O95236 402 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 LYNP07948 512 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SBK2P0C263 348 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 HCCSP53701 268 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 USP51Q70EK9 711 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 THAP5Q7Z6K1 395 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SLC35F2Q8IXU6 374 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ZNF454Q8N9F8 522 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SLC7A6Q92536 515 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SLAMF6Q96DU3 332 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 POM121L2Q96KW2 1035 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 COQ7Q99807 217 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ABHD6Q9BV23 337 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 AMBNQ9NP70 447 aa12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 PNRC2Q9NPJ4 139 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 EIF3KQ9UBQ5 218 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-216ENST00000543995 LOC100509620A0A075B734 347 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 OR6C6A6NF89 314 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SHISA9B4DS77 424 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ZNF878C9JN71 531 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 WBP4O75554 376 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ZNF35P13682 527 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ECH1Q13011 328 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SMN1Q16637 294 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 KRT80Q6KB66 452 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CDC20BQ86Y33 519 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 PAQR4Q8N4S7 273 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 OR4F15Q8NGB8 312 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ST7LQ8TDW4 575 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 AKAP1Q92667 903 aaKnown RBP eCLIP12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 TBX5Q99593 518 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ZNF184Q99676 751 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 TMEM204Q9BSN7 226 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 COPS4Q9BT78 406 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 OR51B6Q9H340 312 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ATPIF1Q9UII2 106 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 RAB26Q9ULW5 256 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 RPL36Q9Y3U8 105 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SPEF1Q9Y4P9 236 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 TMEM14AQ9Y6G1 99 aa12.53□□□□□ -0.4
TNFRSF1A-216ENST00000543995 A0A1W2PPR1 153 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ZNF670-ZNF695F2Z2N8 137 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 F5H5K5 113 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 FAM157BP0CG42 384 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 DBTP11182 482 aaKnown RBP12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ALOX5APP20292 161 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ZNF91Q05481 1191 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CDK5R2Q13319 367 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SNTB2Q13425 540 aaKnown RBP12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 VHLLQ6RSH7 139 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ARL9Q6T311 187 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 OR10H4Q8NGA5 316 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 OR10S1Q8NGN2 331 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 NEUROG1Q92886 237 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SPTSSAQ969W0 71 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 C4orf45Q96LM5 186 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 AMELYQ99218 206 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 MNTQ99583 582 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 TTTY10Q9BZA0 68 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 UBTD1Q9HAC8 227 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CISD1Q9NZ45 108 aaKnown RBP12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 KLHDC2Q9Y2U9 406 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 GRIP1Q9Y3R0 1128 aa12.52□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CADP27708 2225 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 PHYHO14832 338 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 ABHD16AO95870 558 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 DBHP09172 617 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 H2BFMP0C1H6 154 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 PRF1P14222 555 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 HSD11B1P28845 292 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 SLC15A1P46059 708 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 CXCR4P61073 352 aa12.52□□□□□ -0.41
TNFRSF1A-216ENST00000543995 GRB2P62993 217 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms