RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 MYBPHQ13203 477 aa8.81□□□□□ -1
SS18-205ENST00000542420 FAM189A2Q15884 450 aa8.81□□□□□ -1
SS18-205ENST00000542420 RAB12Q6IQ22 244 aa8.81□□□□□ -1
SS18-205ENST00000542420 SLC25A47Q6Q0C1 308 aa8.81□□□□□ -1
SS18-205ENST00000542420 KLHL24Q6TFL4 600 aa8.81□□□□□ -1
SS18-205ENST00000542420 FAM198BQ6UWH4 519 aa8.81□□□□□ -1
SS18-205ENST00000542420 ARSKQ6UWY0 536 aa8.81□□□□□ -1
SS18-205ENST00000542420 SHISA6Q6ZSJ9 500 aa8.81□□□□□ -1
SS18-205ENST00000542420 LYPD6Q86Y78 171 aa8.81□□□□□ -1
SS18-205ENST00000542420 OR4K17Q8NGC6 315 aa8.81□□□□□ -1
SS18-205ENST00000542420 PHF21AQ96BD5 680 aa8.81□□□□□ -1
SS18-205ENST00000542420 ANGPTL4Q9BY76 406 aa8.81□□□□□ -1
SS18-205ENST00000542420 SCP2D1Q9UJQ7 156 aa8.81□□□□□ -1
SS18-205ENST00000542420 FBXO4Q9UKT5 387 aa8.81□□□□□ -1
SS18-205ENST00000542420 KLF2Q9Y5W3 355 aaPredicted RBP8.81□□□□□ -1
SS18-205ENST00000542420 CHCHD2Q9Y6H1 151 aaPredicted RBP8.81□□□□□ -1
SS18-205ENST00000542420 LAMA3Q16787 3333 aa8.8□□□□□ -1
SS18-205ENST00000542420 A0A1B0GVC2 190 aa8.8□□□□□ -1
SS18-205ENST00000542420 A6NIN4 97 aa8.8□□□□□ -1
SS18-205ENST00000542420 AQP7P3A6NL99 342 aa8.8□□□□□ -1
SS18-205ENST00000542420 C17orf51A8MQB3 221 aa8.8□□□□□ -1
SS18-205ENST00000542420 FAM25EA8MYX2 175 aa8.8□□□□□ -1
SS18-205ENST00000542420 LINC01387J3KSC0 135 aa8.8□□□□□ -1
SS18-205ENST00000542420 EIF1BO60739 113 aaKnown RBP8.8□□□□□ -1
SS18-205ENST00000542420 OR2J2O76002 312 aa8.8□□□□□ -1
SS18-205ENST00000542420 MAS1P04201 325 aa8.8□□□□□ -1
SS18-205ENST00000542420 ERCC1P07992 297 aaPredicted RBP8.8□□□□□ -1
SS18-205ENST00000542420 H2BFMP0C1H6 154 aa8.8□□□□□ -1
SS18-205ENST00000542420 PGA4P0DJD7 388 aa8.8□□□□□ -1
SS18-205ENST00000542420 PGA3P0DJD8 388 aa8.8□□□□□ -1
SS18-205ENST00000542420 C4BPBP20851 252 aa8.8□□□□□ -1
SS18-205ENST00000542420 HTR2CP28335 458 aa8.8□□□□□ -1
SS18-205ENST00000542420 POU3F4P49335 361 aa8.8□□□□□ -1
SS18-205ENST00000542420 ZXDAP98168 799 aa8.8□□□□□ -1
SS18-205ENST00000542420 ZMYND11Q15326 602 aa8.8□□□□□ -1
SS18-205ENST00000542420 FAM69BQ5VUD6 431 aa8.8□□□□□ -1
SS18-205ENST00000542420 SLC25A25Q6KCM7 469 aa8.8□□□□□ -1
SS18-205ENST00000542420 GLDNQ6ZMI3 551 aaPredicted RBP8.8□□□□□ -1
SS18-205ENST00000542420 FOXL2NBQ6ZUU3 175 aa8.8□□□□□ -1
SS18-205ENST00000542420 ESPNLQ6ZVH7 1005 aa8.8□□□□□ -1
SS18-205ENST00000542420 PRSS45Q7RTY3 260 aa8.8□□□□□ -1
SS18-205ENST00000542420 DCXRQ7Z4W1 244 aa8.8□□□□□ -1
SS18-205ENST00000542420 ADGRE4PQ86SQ3 457 aa8.8□□□□□ -1
SS18-205ENST00000542420 OR11G2Q8NGC1 345 aa8.8□□□□□ -1
SS18-205ENST00000542420 OR10AC1Q8NH08 325 aa8.8□□□□□ -1
SS18-205ENST00000542420 PIGKQ92643 395 aa8.8□□□□□ -1
SS18-205ENST00000542420 INTS12Q96CB8 462 aaKnown RBP8.8□□□□□ -1
SS18-205ENST00000542420 GPR137Q96N19 417 aa8.8□□□□□ -1
SS18-205ENST00000542420 ZPBPQ9BS86 351 aa8.8□□□□□ -1
SS18-205ENST00000542420 ALX4Q9H161 411 aaPredicted RBP8.8□□□□□ -1
SS18-205ENST00000542420 SH2D2AQ9NP31 389 aa8.8□□□□□ -1
SS18-205ENST00000542420 MYOZ1Q9NP98 299 aaPredicted RBP8.8□□□□□ -1
SS18-205ENST00000542420 NPDC1Q9NQX5 325 aaPredicted RBP8.8□□□□□ -1
SS18-205ENST00000542420 OCIAD1Q9NX40 245 aa8.8□□□□□ -1
SS18-205ENST00000542420 CLEC4AQ9UMR7 237 aa8.8□□□□□ -1
SS18-205ENST00000542420 TRAV6A0A075B6T7 132 aa8.8□□□□□ -1
SS18-205ENST00000542420 TRAF3IP2O43734 574 aaPredicted RBP8.8□□□□□ -1
SS18-205ENST00000542420 GMFGO60234 142 aa8.8□□□□□ -1
SS18-205ENST00000542420 DOK2O60496 412 aa8.8□□□□□ -1
SS18-205ENST00000542420 WISP1O95388 367 aa8.8□□□□□ -1
SS18-205ENST00000542420 MT-ND4P03905 459 aa8.8□□□□□ -1
SS18-205ENST00000542420 AKAIN1P0CW23 69 aa8.8□□□□□ -1
SS18-205ENST00000542420 HLA-DOBP13765 273 aa8.8□□□□□ -1
SS18-205ENST00000542420 CTSSP25774 331 aa8.8□□□□□ -1
SS18-205ENST00000542420 DNASE1L1P49184 302 aa8.8□□□□□ -1
SS18-205ENST00000542420 PSMA6P60900 246 aaKnown RBP8.8□□□□□ -1
SS18-205ENST00000542420 SNRPD2P62316 118 aaKnown RBP8.8□□□□□ -1
SS18-205ENST00000542420 MFGE8Q08431 387 aaPredicted RBP8.8□□□□□ -1
SS18-205ENST00000542420 RBMS2Q15434 407 aaKnown RBP8.8□□□□□ -1
SS18-205ENST00000542420 C2orf76Q3KRA6 126 aa8.8□□□□□ -1
SS18-205ENST00000542420 PHF19Q5T6S3 580 aa8.8□□□□□ -1
SS18-205ENST00000542420 ZBTB37Q5TC79 503 aa8.8□□□□□ -1
SS18-205ENST00000542420 OR7E24Q6IFN5 339 aa8.8□□□□□ -1
SS18-205ENST00000542420 ZNF529Q6P280 563 aa8.8□□□□□ -1
SS18-205ENST00000542420 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.8□□□□□ -1
SS18-205ENST00000542420 OR10G3Q8NGC4 313 aa8.8□□□□□ -1
SS18-205ENST00000542420 OR51A4Q8NGJ6 313 aa8.8□□□□□ -1
SS18-205ENST00000542420 OR1J4Q8NGS1 313 aa8.8□□□□□ -1
SS18-205ENST00000542420 OR2Y1Q8NGV0 311 aa8.8□□□□□ -1
SS18-205ENST00000542420 PAQR8Q8TEZ7 354 aa8.8□□□□□ -1
SS18-205ENST00000542420 FBXW5Q969U6 566 aa8.8□□□□□ -1
SS18-205ENST00000542420 TMEM41AQ96HV5 264 aa8.8□□□□□ -1
SS18-205ENST00000542420 SORCS2Q96PQ0 1159 aa8.8□□□□□ -1
SS18-205ENST00000542420 USB1Q9BQ65 265 aaKnown RBP8.8□□□□□ -1
SS18-205ENST00000542420 FAM206AQ9NX38 181 aa8.8□□□□□ -1
SS18-205ENST00000542420 VDAC3Q9Y277 283 aa8.8□□□□□ -1
SS18-205ENST00000542420 A0A1B0GTH9 108 aa8.79□□□□□ -1
SS18-205ENST00000542420 LOC107986453A0A1B0GWG9 222 aa8.79□□□□□ -1
SS18-205ENST00000542420 ZNF878C9JN71 531 aa8.79□□□□□ -1
SS18-205ENST00000542420 EFNA2O43921 213 aa8.79□□□□□ -1
SS18-205ENST00000542420 GPANK1O95872 356 aa8.79□□□□□ -1
SS18-205ENST00000542420 ITGA5P08648 1049 aa8.79□□□□□ -1
SS18-205ENST00000542420 COX6A1P12074 109 aa8.79□□□□□ -1
SS18-205ENST00000542420 FOSL1P15407 271 aa8.79□□□□□ -1
SS18-205ENST00000542420 IL11P20809 199 aa8.79□□□□□ -1
SS18-205ENST00000542420 ACP1P24666 158 aa8.79□□□□□ -1
SS18-205ENST00000542420 MPZP25189 248 aa8.79□□□□□ -1
SS18-205ENST00000542420 PRSS3P35030 304 aa8.79□□□□□ -1
SS18-205ENST00000542420 BIDP55957 195 aa8.79□□□□□ -1
SS18-205ENST00000542420 DSCR4P56555 118 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms