RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CSMD3Q7Z407 3707 aa3.8□□□□□ -1.8
SNHG1-214ENST00000540865 TRAV36DV7A0A075B6V5 113 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 A0A087WUJ7 227 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 IGHV1-69DA0A0B4J2H0 117 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 A0A0U1RQK1 487 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 EXOC1LA0A1B0GW35 172 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 BTBD17A6NE02 478 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 ZNF785A8K8V0 405 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 ZNF879B4DU55 563 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 RNASEK-C17orf49H0YIS7 233 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 HMGN4O00479 90 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 PHYHO14832 338 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 SURF4O15260 269 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 ZSCAN12O43309 604 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 ENSAO43768 121 aaKnown RBP3.79□□□□□ -1.8
SNHG1-214ENST00000540865 PEX11AO75192 247 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 ZFPL1O95159 310 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 HPRP00739 348 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 IGHV1-69P01742 117 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 LIPFP07098 398 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 FGF4P08620 206 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 NHLRC4P0CG21 123 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-214ENST00000540865 THRBP10828 461 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 HLA-DOBP13765 273 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 MMP9P14780 707 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 NQO1P15559 274 aaKnown RBP3.79□□□□□ -1.8
SNHG1-214ENST00000540865 NCF2P19878 526 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-214ENST00000540865 AHCYP23526 432 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 EPHA3P29320 983 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 GRPRP30550 384 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 GABRA5P31644 462 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 CFHR2P36980 270 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 GNALP38405 381 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 WNT5AP41221 380 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 PITPNBP48739 271 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 ANXA11P50995 505 aaKnown RBP3.79□□□□□ -1.8
SNHG1-214ENST00000540865 EFNB2P52799 333 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 HNRNPA0Q13151 305 aaKnown RBP3.79□□□□□ -1.8
SNHG1-214ENST00000540865 SYPL1Q16563 259 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 KLHL22Q53GT1 634 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 MTX3Q5HYI7 312 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 TMEM255AQ5JRV8 349 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 SPATA46Q5T0L3 261 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 RNF220Q5VTB9 566 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 IL23RQ5VWK5 629 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 WDR25Q64LD2 544 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-214ENST00000540865 SLC35E4Q6ICL7 350 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 OR4F3Q6IEY1 312 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 SLC16A14Q7RTX9 510 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 PXKQ7Z7A4 578 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 CLECL1Q8IZS7 167 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 Q8N1X5 172 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 ANKFN1Q8N957 763 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 SCAIQ8N9R8 606 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 SPERTQ8NA61 448 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 RBM15BQ8NDT2 890 aaKnown RBP3.79□□□□□ -1.8
SNHG1-214ENST00000540865 WFDC9Q8NEX5 89 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 SPATA4Q8NEY3 305 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 OR4F17Q8NGA8 305 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 OR8B3Q8NGG8 313 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 OR6S1Q8NH40 331 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 SLC25A40Q8TBP6 338 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 ACMSDQ8TDX5 336 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 C10orf82Q8WW14 230 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 SLC38A4Q969I6 547 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 TMEM54Q969K7 222 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 SLC35B4Q969S0 331 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 OR4F4Q96R69 305 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 OR8B2Q96RD0 313 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 TBX15Q96SF7 602 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 PCGF1Q9BSM1 259 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 MLST8Q9BVC4 326 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 OR2J1Q9GZK6 312 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 TSPYL1Q9H0U9 437 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 C12orf10Q9HB07 376 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 MAN2C1Q9NTJ4 1040 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 ZDHHC18Q9NUE0 388 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 TMEM38BQ9NVV0 291 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 GLTPQ9NZD2 209 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 CLN8Q9UBY8 286 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 MARCOQ9UEW3 520 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-214ENST00000540865 DCDC2Q9UHG0 476 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 VPREB3Q9UKI3 123 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 EMCNQ9ULC0 261 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 DNAJC15Q9Y5T4 150 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 HECTD4Q9Y4D8 3996 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 PLXNB1O43157 2135 aa3.79□□□□□ -1.8
SNHG1-214ENST00000540865 ABCA13Q86UQ4 5058 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 IGKV1D-42A0A075B6H8 117 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 PRSS51A0A1B0GVH4 220 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 WI2-2373I1.2A0A1W2PRP0 233 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 C5orf49A4QMS7 147 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 ANKRD61A6NGH8 418 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 DIRC3C9JPN6 131 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 E9PQ18 207 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 TIMM8AO60220 97 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-214ENST00000540865 TUSC2O75896 110 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 MMP7P09237 267 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-214ENST00000540865 NR2F1P10589 423 aa3.78□□□□□ -1.8
SNHG1-214ENST00000540865 G6PDP11413 515 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms