RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 NINJ1Q92982 152 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 HRASLS5Q96KN8 279 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 POM121L2Q96KW2 1035 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 PITX2Q99697 317 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 KCNS3Q9BQ31 491 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 TOR3AQ9H497 397 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 DCLRE1BQ9H816 532 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 WDR76Q9H967 626 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 MARCH7Q9H992 704 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 CA10Q9NS85 328 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 PLEK2Q9NYT0 353 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 TVP23BQ9NYZ1 205 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 CISD1Q9NZ45 108 aaKnown RBP6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 CYB5R1Q9UHQ9 305 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 ATPIF1Q9UII2 106 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 KCNG2Q9UJ96 466 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 POU2F3Q9UKI9 436 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 PLEKHA6Q9Y2H5 1048 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 POLR1DQ9Y2S0 133 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 ZANQ9Y493 2812 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 MYO9AB2RTY4 2548 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 C5orf49A4QMS7 147 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 CCDC182A6NF36 153 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 DLGAP1O14490 977 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 GPRIN2O60269 458 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 SMPD2O60906 423 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 SOD3P08294 240 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 COX5BP10606 129 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 ZNF823P16415 610 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 CD53P19397 219 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 NR4A1P22736 598 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 TTKP33981 857 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 WNT5AP41221 380 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 RPS27P42677 84 aaKnown RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 HTR5AP47898 357 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 ENTPD1P49961 510 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 GDI2P50395 445 aaKnown RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 BLVRAP53004 296 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 CDC42P60953 191 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 GALK2Q01415 458 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 APOFQ13790 326 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 GGTLC2Q14390 218 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 LRRC36Q1X8D7 754 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 ZIK1Q3SY52 487 aaPredicted RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 KLHL12Q53G59 568 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 TEX30Q5JUR7 227 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 SLC35D3Q5M8T2 416 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 OGFRL1Q5TC84 451 aaPredicted RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 AADACL4Q5VUY2 407 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 NXNL2Q5VZ03 156 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 C11orf71Q6IPW1 123 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 ZNF544Q6NX49 715 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 CORO6Q6QEF8 472 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 BCDIN3DQ7Z5W3 292 aaKnown RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 DTX2Q86UW9 622 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 TIGD4Q8IY51 512 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 ALDH16A1Q8IZ83 802 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 ZNF101Q8IZC7 436 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 PACRGLQ8N7B6 248 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 TCEANCQ8N8B7 351 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 ZNF511Q8NB15 262 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 GJC3Q8NFK1 279 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 OR10S1Q8NGN2 331 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 OR1J2Q8NGS2 313 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 OR6N2Q8NGY6 317 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 FAM81AQ8TBF8 368 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 ST7LQ8TDW4 575 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 SMAP2Q8WU79 429 aaPredicted RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 TMEM171Q8WVE6 324 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 OTULINQ96BN8 352 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 ZMYND19Q96E35 227 aaPredicted RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 MAP6Q96JE9 813 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 RDH12Q96NR8 316 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 INTS14Q96SY0 518 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 CCL19Q99731 98 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 DHRS9Q9BPW9 319 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 TRAF4Q9BUZ4 470 aaPredicted RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 HDHD2Q9H0R4 259 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 OR51V1Q9H2C8 321 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 ZNF442Q9H7R0 627 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 RNPEPL1Q9HAU8 725 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 CDH20Q9HBT6 801 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 PNRC2Q9NPJ4 139 aaKnown RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 C8orf4Q9NR00 106 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 SMPD3Q9NY59 655 aaPredicted RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 NKX1-2Q9UD57 310 aaPredicted RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 GDF2Q9UK05 429 aaPredicted RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 NDRG4Q9ULP0 352 aaKnown RBP6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 ATP23Q9Y6H3 246 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 TANC2Q9HCD6 1990 aa6.02□□□□□ -1.45
LPCAT3-209ENST00000540060 ARFGEF3Q5TH69 2177 aa6.01□□□□□ -1.45
LPCAT3-209ENST00000540060 TLX2O43763 284 aaPredicted RBP6.01□□□□□ -1.45
LPCAT3-209ENST00000540060 SELENOFO60613 162 aa6.01□□□□□ -1.45
LPCAT3-209ENST00000540060 CD8AP01732 235 aa6.01□□□□□ -1.45
LPCAT3-209ENST00000540060 SPARCP09486 303 aa6.01□□□□□ -1.45
LPCAT3-209ENST00000540060 FAM157BP0CG42 384 aa6.01□□□□□ -1.45
LPCAT3-209ENST00000540060 PCSK6P29122 969 aa6.01□□□□□ -1.45
LPCAT3-209ENST00000540060 GSTT1P30711 240 aa6.01□□□□□ -1.45
LPCAT3-209ENST00000540060 APOBEC3AP31941 199 aaPredicted RBP6.01□□□□□ -1.45
LPCAT3-209ENST00000540060 THBS4P35443 961 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms