RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 LINC01387J3KSC0 135 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 NME2P22392 152 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 ARL16Q0P5N6 197 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 ALKAL2Q6UX46 152 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 CYHR1Q6ZMK1 362 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 LSRQ86X29 649 aaPredicted RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 EXD3Q8N9H8 876 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 OR1M1Q8NGA1 313 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 PDCD1LG2Q9BQ51 273 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 TXNIPQ9H3M7 391 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 A0A1W2PPC4 97 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 M0QYG6 137 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 TBXA2RP21731 343 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 APEX1P27695 318 aaKnown RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 BSGP35613 385 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 CLN3Q13286 438 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 EDDM3AQ14507 147 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 SOHLH1Q5JUK2 328 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 PRSS45Q7RTY3 260 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 BCDIN3DQ7Z5W3 292 aaKnown RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 C1orf87Q8N0U7 546 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 SIRT6Q8N6T7 355 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 ASB13Q8WXK3 278 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 SARAFQ96BY9 339 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 EMC6Q9BV81 110 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 TMEM9BQ9NQ34 198 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 COL5A3P25940 1745 aaPredicted RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 LGALS8O00214 317 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 HPNP05981 417 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 GIPP09681 153 aaPredicted RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 DIO1P49895 249 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 ISL1P61371 349 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 SLC38A9Q8NBW4 561 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 OR51A4Q8NGJ6 313 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 OR5M1Q8NGP8 315 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 PLK3Q9H4B4 646 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 ANKRD10Q9NXR5 420 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 CGGBP1Q9UFW8 167 aaPredicted RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 NTNG1Q9Y2I2 539 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 PCYT1BQ9Y5K3 369 aaPredicted RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 PRSS37A4D1T9 235 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 AIPO00170 330 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 JTBO76095 146 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 B3GALT4O96024 378 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 NRASP01111 189 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 SPI1P17947 270 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 PTAFRP25105 342 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 HES1Q14469 280 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 VWA2Q5GFL6 755 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 RBM45Q8IUH3 476 aaKnown RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 BSCL2Q96G97 398 aaPredicted RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 ZIC5Q96T25 663 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 GPR173Q9NS66 373 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 CTSFQ9UBX1 484 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 SLC17A4Q9Y2C5 497 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 HMX2A2RU54 273 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 LILRA5A6NI73 299 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 ZNF705GA8MUZ8 300 aaPredicted RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 IL2RAP01589 272 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 RPS19P39019 145 aaKnown RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 CCR6P51684 374 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 TMEM41BQ5BJD5 291 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 OTUD1Q5VV17 481 aaPredicted RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 IL34Q6ZMJ4 242 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 SYS1Q8N2H4 156 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 TTC9Q92623 222 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 UBE2FQ969M7 185 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 SMIM19Q96E16 107 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 ZNF75AQ96N20 296 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 LIN7CQ9NUP9 197 aaKnown RBP5.91□□□□□ -1.46
LSAMP-207ENST00000539563 ZNF225Q9UK10 706 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 RNF150Q9ULK6 438 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 OTOFQ9HC10 1997 aa5.91□□□□□ -1.46
LSAMP-207ENST00000539563 ARPC4-TTLL3A0A0A6YYG9 625 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 M0R135 149 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 F10P00742 488 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 ST6GAL1P15907 406 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 TAGLN2P37802 199 aaKnown RBP5.9□□□□□ -1.46
LSAMP-207ENST00000539563 NKX2-1P43699 371 aaPredicted RBP5.9□□□□□ -1.46
LSAMP-207ENST00000539563 ERHP84090 104 aaKnown RBP5.9□□□□□ -1.46
LSAMP-207ENST00000539563 OR10X1Q8NGY0 326 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 ZNF799Q96GE5 643 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 SLC35E1Q96K37 410 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 FGF20Q9NP95 211 aaPredicted RBP5.9□□□□□ -1.46
LSAMP-207ENST00000539563 PROCRQ9UNN8 238 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 LAMP3Q9UQV4 416 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 TMPRSS11DO60235 418 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 ICOSLGO75144 302 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 LALBAP00709 142 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 CLEC3BP05452 202 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 LIPAP38571 399 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 DDOSTP39656 456 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 USP51Q70EK9 711 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 TMUB2Q71RG4 321 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 CDC20BQ86Y33 519 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 LINC01599Q8WXQ3 324 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 DVL3Q92997 716 aaPredicted RBP5.9□□□□□ -1.46
LSAMP-207ENST00000539563 TRIB1Q96RU8 372 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 NRSN2Q9GZP1 204 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 BANF2Q9H503 90 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms