RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 HIST1H2BBP33778 126 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 HIST1H2BDP58876 126 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 HIST1H2BCP62807 126 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 ELOCQ15369 112 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 HAGHQ16775 308 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 HIST2H2BEQ16778 126 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 TIPARPQ7Z3E1 657 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 ZCCHC10Q8TBK6 192 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 HIST1H2BHQ93079 126 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 SMIM19Q96E16 107 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 HIST1H2BNQ99877 126 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 HIST1H2BMQ99879 126 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 WDR81Q562E7 1941 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 A0A087WUU8 490 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 CYB5BO43169 146 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF821O75541 412 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 MANFP55145 182 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 ADAM8P78325 824 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 LTBQ06643 244 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 SOHLH1Q5JUK2 328 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 RPL22L1Q6P5R6 122 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 PPP1R3BQ86XI6 285 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 OR4K14Q8NGD5 310 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 IFI44Q8TCB0 444 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 CASTOR1Q8WTX7 329 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC25A31Q9H0C2 315 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 PITPNC1Q9UKF7 332 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 PDGFBP01127 241 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 CD3DP04234 171 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 HNRNPA2B1P22626 353 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 NTSP30990 170 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF750Q32MQ0 723 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 BTNL8Q6UX41 500 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF705AQ6ZN79 300 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC35D2Q76EJ3 337 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 LYG2Q86SG7 212 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 LRRTM4Q86VH4 590 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 GABRG1Q8N1C3 465 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 C2orf73Q8N5S3 287 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 LMX1AQ8TE12 382 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 SCAMP4Q969E2 229 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 MVB12AQ96EY5 273 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 LOXL4Q96JB6 756 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 SAMD8Q96LT4 415 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC12A9Q9BXP2 914 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 OR5V1Q9UGF6 321 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 KNTC1P50748 2209 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 TMEM269A0A1B0GVZ9 245 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF724A8MTY0 619 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC2A10O95528 541 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 FURINP09958 794 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 TLX1P31314 330 aaPredicted RBP9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 SULT1A2P50226 295 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 RPS23P62266 143 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 IQCJQ1A5X6 159 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 KIAA0895LQ68EN5 471 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 OR4D11Q8NGI4 311 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 OR13C2Q8NGS9 318 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 EXTL1Q92935 676 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 RAB39BQ96DA2 213 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 PCED1AQ9H1Q7 454 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 SH3BGRL2Q9UJC5 107 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 TRAV18A0A075B6X5 111 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 DNAJB6O75190 326 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 OPRD1P41143 372 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 MC3RP41968 323 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 GPR4P46093 362 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC6A12P48065 614 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 RAE1P78406 368 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 IL13RA1P78552 427 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF616Q08AN1 781 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 CDK5R1Q15078 307 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 TP53I3Q53FA7 332 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 C1orf189Q5VU69 101 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 BHLHA9Q7RTU4 235 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 DVL3Q92997 716 aaPredicted RBP9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 BOCQ9BWV1 1114 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 LGR4Q9BXB1 951 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC35B3Q9H1N7 401 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 MYOTQ9UBF9 498 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 HDGFL3Q9Y3E1 203 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 C19orf67A6NJJ6 358 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 ERAL1O75616 437 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 SP9P0CG40 484 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 TAGLN2P37802 199 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 RABIFP47224 123 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 TAS2R50P59544 299 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 ERVFC1-1P60608 527 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 RPS13P62277 151 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 NEURL3Q96EH8 262 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 GPR87Q9BY21 358 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 ACTR3CQ9C0K3 210 aaPredicted RBP9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 METTL8Q9H825 291 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 NEUROD4Q9HD90 331 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 CBLN4Q9NTU7 201 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 MEIS3P1A6NDR6 274 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 UNC119BA6NIH7 251 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 GUSBP08236 651 aa9.85□□□□□ -0.83
CLSTN3-207ENST00000537408 CST2P09228 141 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms