RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 C10orf82Q8WW14 230 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 RASSF5Q8WWW0 418 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 HIST1H2ACQ93077 130 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 TAMM41Q96BW9 452 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 HAVCR1Q96D42 359 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 HRASLS5Q96KN8 279 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 C4orf45Q96LM5 186 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 CGREF1Q99674 301 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 GAL3ST1Q99999 423 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 ALG12Q9BV10 488 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 C1QTNF5Q9BXJ0 243 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 OR2H1Q9GZK4 316 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 EGLN1Q9GZT9 426 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 KCNN2Q9H2S1 579 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 TXNIPQ9H3M7 391 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 CENPHQ9H3R5 247 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 UNKLQ9H9P5 680 aaKnown RBP4.4□□□□□ -1.71
SNHG1-204ENST00000537068 NANOGQ9H9S0 305 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 ELOVL3Q9HB03 270 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 TMBIM4Q9HC24 238 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 MSL2Q9HCI7 577 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 INIPQ9NRY2 104 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 TMEM106BQ9NUM4 274 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 TBCCD1Q9NVR7 557 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 DCAF16Q9NXF7 216 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 STX18Q9P2W9 335 aaKnown RBP4.4□□□□□ -1.71
SNHG1-204ENST00000537068 EIF3KQ9UBQ5 218 aaKnown RBP4.4□□□□□ -1.71
SNHG1-204ENST00000537068 IL20RAQ9UHF4 553 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 SLC13A4Q9UKG4 626 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 TIMM10BQ9Y5J6 103 aa4.4□□□□□ -1.71
SNHG1-204ENST00000537068 MGAM2Q2M2H8 2515 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 A0A0G2JK05 382 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 A0A1B0GUS0 222 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 GMNCA6NCL1 334 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 TMEM178BH3BS89 294 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 TPD52L2O43399 206 aaKnown RBP4.39□□□□□ -1.71
SNHG1-204ENST00000537068 OR5F1O95221 314 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 SBK2P0C263 348 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 UMPSP11172 480 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 NR2C1P13056 603 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 TNFRSF1AP19438 455 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 CCNOP22674 350 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 LAP3P28838 519 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 GDI2P50395 445 aaKnown RBP4.39□□□□□ -1.71
SNHG1-204ENST00000537068 BPIFB3P59826 476 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 RPL27P61353 136 aaKnown RBP4.39□□□□□ -1.71
SNHG1-204ENST00000537068 PCBD1P61457 104 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 BTG1P62324 171 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 TNFAIP6P98066 277 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-204ENST00000537068 HSF2Q03933 536 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 GLO1Q04760 184 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 FMODQ06828 376 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 BAMBIQ13145 260 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 HNRNPA0Q13151 305 aaKnown RBP4.39□□□□□ -1.71
SNHG1-204ENST00000537068 IKZF1Q13422 519 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 ZMYND11Q15326 602 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 ZNF181Q2M3W8 571 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 VMACQ2NL98 169 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 ANKDD1AQ495B1 522 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 ZMAT1Q5H9K5 638 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 MTX3Q5HYI7 312 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 SPATA46Q5T0L3 261 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 INTS11Q5TA45 600 aaKnown RBP4.39□□□□□ -1.71
SNHG1-204ENST00000537068 NANOGP8Q6NSW7 305 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 C16orf87Q6PH81 154 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 RBMS3Q6XE24 437 aaKnown RBP4.39□□□□□ -1.71
SNHG1-204ENST00000537068 RFPL4BQ6ZWI9 263 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 ZER1Q7Z7L7 766 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 CALHM3Q86XJ0 350 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 SPICQ8N5J4 248 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 POU5F2Q8N7G0 328 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 FAM156AQ8NDB6 213 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 ICA1LQ8NDH6 482 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 OR52E2Q8NGJ4 325 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 PFN4Q8NHR9 129 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 VANGL1Q8TAA9 524 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-204ENST00000537068 ABHD4Q8TB40 342 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 TMEM255BQ8WV15 326 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 TMEM239Q8WW34 195 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 GEMIN6Q8WXD5 167 aaKnown RBP4.39□□□□□ -1.71
SNHG1-204ENST00000537068 PTP4A1Q93096 173 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 SLC25A28Q96A46 364 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 UPRTQ96BW1 309 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 ZBTB9Q96C00 473 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 SGTBQ96EQ0 304 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 RBP7Q96R05 134 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 KCNJ15Q99712 375 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 RABEP2Q9H5N1 569 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 TMEM165Q9HC07 324 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 GCM1Q9NP62 436 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 CCNB1IP1Q9NPC3 277 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 MAN2C1Q9NTJ4 1040 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 NKIRAS1Q9NYS0 192 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 ARMCX1Q9P291 453 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.39□□□□□ -1.71
SNHG1-204ENST00000537068 RIMS3Q9UJD0 308 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 LRCH1Q9Y2L9 728 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 STARD10Q9Y365 291 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 NDUFAF1Q9Y375 327 aa4.39□□□□□ -1.71
SNHG1-204ENST00000537068 V9GYY5 206 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms