RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ERFP50548 548 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 MMP15P51511 669 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 CCL8P80075 99 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 TEKQ02763 1124 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 TRAP1Q12931 704 aaKnown RBP12.17□□□□□ -0.46
UBE3B-206ENST00000536398 HNRNPA0Q13151 305 aaKnown RBP12.17□□□□□ -0.46
UBE3B-206ENST00000536398 TSTQ16762 297 aaKnown RBP12.17□□□□□ -0.46
UBE3B-206ENST00000536398 ZNF362Q5T0B9 420 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-206ENST00000536398 TMEM154Q6P9G4 183 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 TMEM179BQ7Z7N9 219 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 CYB561A3Q8NBI2 242 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 ZNF540Q8NDQ6 660 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 SLC26A10Q8NG04 563 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 OR4Q3Q8NH05 313 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 OR1F12Q8NHA8 337 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 RDH5Q92781 318 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 MSI2Q96DH6 328 aaKnown RBP12.17□□□□□ -0.46
UBE3B-206ENST00000536398 SNX18Q96RF0 628 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 NIPSNAP1Q9BPW8 284 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 WACQ9BTA9 647 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 REEP1Q9H902 201 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 PLEK2Q9NYT0 353 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 IL20Q9NYY1 176 aa12.17□□□□□ -0.46
UBE3B-206ENST00000536398 NDRG4Q9ULP0 352 aaKnown RBP12.17□□□□□ -0.46
UBE3B-206ENST00000536398 SPRY3O43610 288 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 IDH3BO43837 385 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 ICMTO60725 284 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 COX5BP10606 129 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 GCH1P30793 250 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 RBMXP38159 391 aaKnown RBP12.16□□□□□ -0.46
UBE3B-206ENST00000536398 HIST1H3AP68431 136 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 PSG7Q13046 419 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 RSPO1Q2MKA7 263 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-206ENST00000536398 SPRNQ5BIV9 151 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 HIST2H3PS2Q5TEC6 136 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 MBNL2Q5VZF2 373 aaKnown RBP12.16□□□□□ -0.46
UBE3B-206ENST00000536398 RASSF6Q6ZTQ3 369 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 HIST2H3AQ71DI3 136 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 ZBTB46Q86UZ6 589 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 LINC00346Q8IVM7 164 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 LINC00471Q8N535 108 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 OR51L1Q8NGJ5 315 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 SNX33Q8WV41 574 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 TSSK6Q9BXA6 273 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 DGCR6LQ9BY27 220 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 ZNF275Q9NSD4 429 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-206ENST00000536398 ARMC1Q9NVT9 282 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 GPR160Q9UJ42 338 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 POLR1DQ9Y2S0 133 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 STARD10Q9Y365 291 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 CACNG2Q9Y698 323 aa12.16□□□□□ -0.46
UBE3B-206ENST00000536398 DNHD1Q96M86 4753 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 DHRS12A0PJE2 317 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 ZSCAN5BA6NJL1 495 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 AQP12BA6NM10 295 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 RP2O75695 350 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 CST1P01037 141 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 IGHV1-46P01743 117 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 TACSTD2P09758 323 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 PSKH1P11801 424 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 GGT2P36268 569 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 ARHGDIAP52565 204 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 DNM1P34Q6PK57 102 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 LYPD4Q6UWN0 246 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 CFAP77Q6ZQR2 320 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 AQP12AQ8IXF9 295 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 HS3ST5Q8IZT8 346 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 SLC37A3Q8NCC5 494 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 OR10G2Q8NGC3 310 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 OR52L1Q8NGH7 329 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 CMBLQ96DG6 245 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 FEVQ99581 238 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 CADM1Q9BY67 442 aaKnown RBP12.15□□□□□ -0.46
UBE3B-206ENST00000536398 RACGAP1Q9H0H5 632 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 NARFLQ9H6Q4 476 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 CHODLQ9H9P2 273 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 ELOVL3Q9HB03 270 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 MSL2Q9HCI7 577 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 TBC1D23Q9NUY8 699 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 TBCCD1Q9NVR7 557 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 MRPL22Q9NWU5 206 aaKnown RBP12.15□□□□□ -0.46
UBE3B-206ENST00000536398 TREM2Q9NZC2 230 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 KLHL21Q9UJP4 597 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 JMJD1CQ15652 2540 aa12.15□□□□□ -0.46
UBE3B-206ENST00000536398 LOC100289279A0A1B0GTE1 492 aa12.14□□□□□ -0.47
UBE3B-206ENST00000536398 TVP23AA6NH52 213 aa12.14□□□□□ -0.47
UBE3B-206ENST00000536398 DNAJC8O75937 253 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-206ENST00000536398 HLA-DQA2P01906 255 aa12.14□□□□□ -0.47
UBE3B-206ENST00000536398 ACHEP22303 614 aa12.14□□□□□ -0.47
UBE3B-206ENST00000536398 RPS27P42677 84 aaKnown RBP12.14□□□□□ -0.47
UBE3B-206ENST00000536398 GPR6P46095 362 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-206ENST00000536398 GZMKP49863 264 aa12.14□□□□□ -0.47
UBE3B-206ENST00000536398 ZNF81P51508 661 aa12.14□□□□□ -0.47
UBE3B-206ENST00000536398 COX10Q12887 443 aa12.14□□□□□ -0.47
UBE3B-206ENST00000536398 BNIP1Q12981 228 aa12.14□□□□□ -0.47
UBE3B-206ENST00000536398 CCNIQ14094 377 aa12.14□□□□□ -0.47
UBE3B-206ENST00000536398 HLXQ14774 488 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-206ENST00000536398 MOGQ16653 247 aa12.14□□□□□ -0.47
UBE3B-206ENST00000536398 DNAL1Q4LDG9 190 aa12.14□□□□□ -0.47
UBE3B-206ENST00000536398 SLC18B1Q6NT16 456 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms