RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 WBP2Q969T9 261 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 BPIFA2Q96DR5 249 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 LINC00615Q96LM1 132 aaPredicted RBP5.92□□□□□ -1.46
USP28-202ENST00000535607 PRAP1Q96NZ9 151 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 TRMT61BQ9BVS5 477 aaKnown RBP5.92□□□□□ -1.46
USP28-202ENST00000535607 RAB11FIP5Q9BXF6 653 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 GLIPR2Q9H4G4 154 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 ESRP2Q9H6T0 727 aaKnown RBP5.92□□□□□ -1.46
USP28-202ENST00000535607 C8orf33Q9H7E9 229 aaPredicted RBP5.92□□□□□ -1.46
USP28-202ENST00000535607 NOX4Q9NPH5 578 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 PRMT8Q9NR22 394 aaPredicted RBP5.92□□□□□ -1.46
USP28-202ENST00000535607 UQCC1Q9NVA1 299 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 LRIT1Q9P2V4 623 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 DNAJB11Q9UBS4 358 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 KLK11Q9UBX7 282 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 STEAP1Q9UHE8 339 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 TINAGQ9UJW2 476 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 GPR34Q9UPC5 381 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 SLC27A6Q9Y2P4 619 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 NOP16Q9Y3C1 178 aaKnown RBP5.92□□□□□ -1.46
USP28-202ENST00000535607 WNT6Q9Y6F9 365 aa5.92□□□□□ -1.46
USP28-202ENST00000535607 MUC22E2RYF6 1773 aaPredicted RBP5.91□□□□□ -1.46
USP28-202ENST00000535607 C5orf52A6NGY3 159 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 LINC00587B1AMM8 73 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 E9PI62 339 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 GPR31O00270 319 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 MFNGO00587 321 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 PPM1DO15297 605 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 NUDT21O43809 227 aaKnown RBP5.91□□□□□ -1.46
USP28-202ENST00000535607 VEGFDO43915 354 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 FADS1O60427 444 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 RAB3DO95716 219 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 CYB5AP00167 134 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 IGF2P01344 180 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 IFNA10P01566 189 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 CTSLP07711 333 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 CHRM2P08172 466 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 MRPL3P09001 348 aaKnown RBP5.91□□□□□ -1.46
USP28-202ENST00000535607 ELFN1P0C7U0 828 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 CD79AP11912 226 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 ACHEP22303 614 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 ITPKBP27987 946 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 ABCD3P28288 659 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 PBLDP30039 288 aaPredicted RBP5.91□□□□□ -1.46
USP28-202ENST00000535607 MAP3K8P41279 467 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 PTGFRP43088 359 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 GLP1RP43220 463 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 CX3CR1P49238 355 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 CTSCP53634 463 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 UBE2MP61081 183 aaKnown RBP5.91□□□□□ -1.46
USP28-202ENST00000535607 SNRPEP62304 92 aaKnown RBP5.91□□□□□ -1.46
USP28-202ENST00000535607 RASGEF1BQ0VAM2 473 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 RUNX3Q13761 415 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 INPP5JQ15735 1006 aaPredicted RBP5.91□□□□□ -1.46
USP28-202ENST00000535607 RPE65Q16518 533 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 ISXQ2M1V0 245 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 ARHGAP11BQ3KRB8 267 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 ITPRIPL2Q3MIP1 535 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 TP53I3Q53FA7 332 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 TANGO2Q6ICL3 276 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 OR10K2Q6IF99 312 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 OR7E24Q6IFN5 339 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 ZNF425Q6IV72 752 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 ANKRD16Q6P6B7 361 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 TMEM88Q6PEY1 159 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 FRRS1Q6ZNA5 592 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 Q7L0L9 218 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 DPPA4Q7L190 304 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 TECPR1Q7Z6L1 1165 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 NAA40Q86UY6 237 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 TRAPPC5Q8IUR0 188 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 MISPQ8IVT2 679 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 NKAIN4Q8IVV8 208 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 BAP18Q8IXM2 172 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 DND1Q8IYX4 353 aaKnown RBP5.91□□□□□ -1.46
USP28-202ENST00000535607 GALNT16Q8N428 558 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 ZDHHC22Q8N966 263 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 C17orf47Q8NEP4 570 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 SLC30A7Q8NEW0 376 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 OR4C16Q8NGL9 310 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 OR5AK2Q8NH90 309 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 GPR148Q8TDV2 347 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 PAQR8Q8TEZ7 354 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 TMEM255BQ8WV15 326 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 TFGQ92734 400 aaPredicted RBP5.91□□□□□ -1.46
USP28-202ENST00000535607 FGF14Q92915 247 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 SLC25A38Q96DW6 304 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 PELI1Q96FA3 418 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 Q96MF0 132 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 MS4A4EQ96PG1 132 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 SCGB3A2Q96PL1 93 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 DERL3Q96Q80 235 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 HIST1H2AAQ96QV6 131 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 F2RL3Q96RI0 385 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 PFDN5Q99471 154 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 S100A13Q99584 98 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 KXD1Q9BQD3 176 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 EGLN1Q9GZT9 426 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 UCK1Q9HA47 277 aa5.91□□□□□ -1.46
USP28-202ENST00000535607 SEBOXQ9HB31 216 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms