RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 PRB3Q04118 309 aaPredicted RBP10.11□□□□□ -0.79
SVIP-205ENST00000533774 RPL18Q07020 188 aaKnown RBP10.11□□□□□ -0.79
SVIP-205ENST00000533774 ZNF181Q2M3W8 571 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 ARMC4Q5T2S8 1044 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 HHATQ5VTY9 493 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 DCDC5Q6ZRR9 648 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 NUDCD3Q8IVD9 361 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 SCCPDHQ8NBX0 429 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 MCHR1Q99705 422 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 PAIP1Q9H074 479 aaKnown RBP10.11□□□□□ -0.79
SVIP-205ENST00000533774 MMP28Q9H239 520 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 PPCSQ9HAB8 311 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 TBCCD1Q9NVR7 557 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 ZNF229Q9UJW7 825 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 TMCC3Q9ULS5 477 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 USH1CQ9Y6N9 552 aa10.11□□□□□ -0.79
SVIP-205ENST00000533774 MEGF11A6BM72 1044 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 CENPBD1B2RD01 187 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 C5orf58C9J3I9 102 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 CLIC1O00299 241 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 CHP2O43745 196 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 IL6P05231 212 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 CST2P09228 141 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 GABRA5P31644 462 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 TGFBR2P37173 567 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 ARF6P62330 175 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 PTOV1Q86YD1 416 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 RBM45Q8IUH3 476 aaKnown RBP10.1□□□□□ -0.79
SVIP-205ENST00000533774 MSRB3Q8IXL7 192 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 NPEPL1Q8NDH3 523 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 OR4D11Q8NGI4 311 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 MOSPD2Q8NHP6 518 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 LRTOMTQ8WZ04 291 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 SLC7A6Q92536 515 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 GTF2H4Q92759 462 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 TECTBQ96PL2 329 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 WDR55Q9H6Y2 383 aaPredicted RBP10.1□□□□□ -0.79
SVIP-205ENST00000533774 MEPEQ9NQ76 525 aaPredicted RBP10.1□□□□□ -0.79
SVIP-205ENST00000533774 SLC25A37Q9NYZ2 338 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 HAO1Q9UJM8 370 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 TIMM10BQ9Y5J6 103 aa10.1□□□□□ -0.79
SVIP-205ENST00000533774 A0A1W2PRG6 482 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 WI2-2373I1.2A0A1W2PRP0 233 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 CPSF4LA6NMK7 179 aaKnown RBP10.09□□□□□ -0.79
SVIP-205ENST00000533774 ADARB2-AS1A8MUL3 147 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 MCIDASD6RGH6 385 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 XPNPEP2O43895 674 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 TYROBPO43914 113 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 FMO6PO60774 539 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 PPP1R3DO95685 299 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 SERPINE1P05121 402 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 UMPSP11172 480 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 EPHA3P29320 983 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 AQP2P41181 271 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 DLX1P56177 255 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 FADDQ13158 208 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 NSUN5P1Q3KNT7 163 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 METTL11BQ5VVY1 283 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 NXNQ6DKJ4 435 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 OR2T2Q6IF00 324 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 REEP3Q6NUK4 255 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 ZNF613Q6PF04 617 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 FOXL2NBQ6ZUU3 175 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 NANOGNBQ7Z5D8 188 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 ALDH16A1Q8IZ83 802 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 FGFRL1Q8N441 504 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 GALNT4Q8N4A0 578 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 KLHDC1Q8N7A1 406 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 OR6T1Q8NGN1 323 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 OR9I1Q8NGQ6 314 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 ITCHQ96J02 903 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 ZBTB18Q99592 522 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 ZNF426Q9BUY5 554 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 PPA2Q9H2U2 334 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 RAD21L1Q9H4I0 556 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 SMURF2Q9HAU4 748 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 KIF17Q9P2E2 1029 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 DNAH7Q8WXX0 4024 aa10.09□□□□□ -0.79
SVIP-205ENST00000533774 SLC22A3O75751 556 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 HLA-DPB1P04440 258 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 HIST1H2ABP04908 130 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 IGLL1P15814 213 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 AQP1P29972 269 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 SLC1A6P48664 564 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 SRP9P49458 86 aaKnown RBP10.08□□□□□ -0.8
SVIP-205ENST00000533774 CDK6Q00534 326 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 GUCY1A3Q02108 690 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 COL10A1Q03692 680 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 CD47Q08722 323 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 ENTPD8Q5MY95 495 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 CLEC12AQ5QGZ9 265 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 C6orf10Q5SRN2 563 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 C1orf94Q6P1W5 598 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 TTC33Q6PID6 262 aaPredicted RBP10.08□□□□□ -0.8
SVIP-205ENST00000533774 SLC2A7Q6PXP3 512 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 HIST3H2AQ7L7L0 130 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 VMO1Q7Z5L0 202 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 SMYD1Q8NB12 490 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 MNS1Q8NEH6 495 aa10.08□□□□□ -0.8
SVIP-205ENST00000533774 OR8G5Q8NG78 346 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms