RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 HIST1H2ACQ93077 130 aa6.44□□□□□ -1.38
NXF1-215ENST00000533440 PTP4A1Q93096 173 aa6.44□□□□□ -1.38
NXF1-215ENST00000533440 LHX4Q969G2 390 aa6.44□□□□□ -1.38
NXF1-215ENST00000533440 PHF21AQ96BD5 680 aa6.44□□□□□ -1.38
NXF1-215ENST00000533440 MCHR1Q99705 422 aa6.44□□□□□ -1.38
NXF1-215ENST00000533440 PAIP1Q9H074 479 aaKnown RBP6.44□□□□□ -1.38
NXF1-215ENST00000533440 SIRPDQ9H106 197 aa6.44□□□□□ -1.38
NXF1-215ENST00000533440 PNPOQ9NVS9 261 aa6.44□□□□□ -1.38
NXF1-215ENST00000533440 VPREB3Q9UKI3 123 aa6.44□□□□□ -1.38
NXF1-215ENST00000533440 NDRG4Q9ULP0 352 aaKnown RBP6.44□□□□□ -1.38
NXF1-215ENST00000533440 STARD10Q9Y365 291 aa6.44□□□□□ -1.38
NXF1-215ENST00000533440 USH1CQ9Y6N9 552 aa6.44□□□□□ -1.38
NXF1-215ENST00000533440 DNAH7Q8WXX0 4024 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 A0A1B0GWJ7 208 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 WDR91A4D1P6 747 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 GMNCA6NCL1 334 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 NPIPB13A6NJU9 1138 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 LRRC30A6NM36 301 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 NPIPB4C9JG80 1138 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 BLOC1S5-TXNDC5H3BN57 136 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 BIRC5O15392 142 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 MLNRO43193 412 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 TSPAN19P0C672 248 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 RAC2P15153 192 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 SLC6A2P23975 617 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 SLC1A6P48664 564 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 SRP9P49458 86 aaKnown RBP6.43□□□□□ -1.38
NXF1-215ENST00000533440 DAP3P51398 398 aaKnown RBP6.43□□□□□ -1.38
NXF1-215ENST00000533440 EFNB2P52799 333 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 GUCY1A3Q02108 690 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 DBPQ10586 325 aaPredicted RBP6.43□□□□□ -1.38
NXF1-215ENST00000533440 ENDOGQ14249 297 aaKnown RBP6.43□□□□□ -1.38
NXF1-215ENST00000533440 NPTX1Q15818 432 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 ENTPD8Q5MY95 495 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 C6orf10Q5SRN2 563 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 GCNT6Q5T4J0 391 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 METTL11BQ5VVY1 283 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 NXNQ6DKJ4 435 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 VASH1Q7L8A9 365 aaPredicted RBP6.43□□□□□ -1.38
NXF1-215ENST00000533440 MOGAT3Q86VF5 341 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 TSPYL5Q86VY4 417 aaPredicted RBP6.43□□□□□ -1.38
NXF1-215ENST00000533440 OR8G5Q8NG78 346 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 OR10AD1Q8NGE0 317 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 OR13G1Q8NGZ3 307 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 NSMAFQ92636 917 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 MPP4Q96JB8 637 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 C16orf45Q96MC5 204 aaPredicted RBP6.43□□□□□ -1.38
NXF1-215ENST00000533440 COG8Q96MW5 612 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 WWC2-AS2Q96NR7 200 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 WDR55Q9H6Y2 383 aaPredicted RBP6.43□□□□□ -1.38
NXF1-215ENST00000533440 MEPEQ9NQ76 525 aaPredicted RBP6.43□□□□□ -1.38
NXF1-215ENST00000533440 INIPQ9NRY2 104 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 ZIM2Q9NZV7 527 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 ZNRD1Q9P1U0 126 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 STX18Q9P2W9 335 aaKnown RBP6.43□□□□□ -1.38
NXF1-215ENST00000533440 CTSZQ9UBR2 303 aa6.43□□□□□ -1.38
NXF1-215ENST00000533440 CPSF4LA6NMK7 179 aaKnown RBP6.42□□□□□ -1.38
NXF1-215ENST00000533440 RNASEK-C17orf49H0YIS7 233 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 M0R3H8 397 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 KPNA4O00629 521 aaPredicted RBP6.42□□□□□ -1.38
NXF1-215ENST00000533440 SERPINB7O75635 380 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 FBP1P09467 338 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 UMPSP11172 480 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 NR2C1P13056 603 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 IDO1P14902 403 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 GABRA5P31644 462 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 AQP2P41181 271 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 GATA4P43694 442 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 POLR2JP52435 117 aaKnown RBP6.42□□□□□ -1.38
NXF1-215ENST00000533440 CD47Q08722 323 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 FOXB2Q5VYV0 432 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 C11orf88Q6PI97 169 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 FBXW12Q6X9E4 464 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 LIAT1Q6ZQX7 453 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 ARMC8Q8IUR7 673 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 MSRB3Q8IXL7 192 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 OR5AS1Q8N127 324 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 PNLDC1Q8NA58 520 aaKnown RBP6.42□□□□□ -1.38
NXF1-215ENST00000533440 SCCPDHQ8NBX0 429 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 OR6T1Q8NGN1 323 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 Q8TCH9 128 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 ADAMTS16Q8TE57 1224 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 NPRL2Q8WTW4 380 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 MAELQ96JY0 434 aaKnown RBP6.42□□□□□ -1.38
NXF1-215ENST00000533440 TECTBQ96PL2 329 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 PRSS27Q9BQR3 290 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 WACQ9BTA9 647 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 ALG12Q9BV10 488 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 TMEM38AQ9H6F2 299 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 SDR39U1Q9NRG7 319 aaPredicted RBP6.42□□□□□ -1.38
NXF1-215ENST00000533440 SLC25A37Q9NYZ2 338 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 ERVK-18Q9QC07 812 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 SLC13A4Q9UKG4 626 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 FOXJ3Q9UPW0 622 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 GMEB1Q9Y692 573 aa6.42□□□□□ -1.38
NXF1-215ENST00000533440 IGHV3-64DA0A0J9YX35 117 aa6.41□□□□□ -1.38
NXF1-215ENST00000533440 TRAPPC13A5PLN9 417 aa6.41□□□□□ -1.38
NXF1-215ENST00000533440 BTBD17A6NE02 478 aa6.41□□□□□ -1.38
NXF1-215ENST00000533440 C12orf71A8MTZ7 269 aa6.41□□□□□ -1.38
NXF1-215ENST00000533440 F5H5P2 479 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms