RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SH2D2AQ9NP31 389 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 DIABLOQ9NR28 239 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 MRPL22Q9NWU5 206 aaKnown RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 OCIAD1Q9NX40 245 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 SLC39A1Q9NY26 324 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 SLCO1C1Q9NYB5 712 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 STMN3Q9NZ72 180 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 NLKQ9UBE8 527 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 MALT1Q9UDY8 824 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 DHDHQ9UQ10 334 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 KLHDC2Q9Y2U9 406 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 MRPS18CQ9Y3D5 142 aaKnown RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 AK6Q9Y3D8 172 aaKnown RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 PTRH2Q9Y3E5 179 aaKnown RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 CHCHD2Q9Y6H1 151 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 LAMA3Q16787 3333 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 NSG1A0A0A6YYJ2 146 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 A0A1B0GVI7 797 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 LOC390937A0A1W2PQ73 354 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 TMEM221A6NGB7 291 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 FAM171A2A8MVW0 826 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 ZNF878C9JN71 531 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 XRCC3O43542 346 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 SSX4O60224 188 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 SRSF10O75494 262 aaKnown RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 CBR3O75828 277 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 KLF7O75840 302 aaPredicted RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 HPP00738 406 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 PLGP00747 810 aaPredicted RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 C1QBP02746 253 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 TCRBP04435 133 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 UMODP07911 640 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 CSF1P09603 554 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 H2BFMP0C1H6 154 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 COX6A1P12074 109 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 ARSBP15848 533 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 IGFBP3P17936 291 aaPredicted RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 STOMP27105 288 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 GUCA1AP43080 201 aaPredicted RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 KIR3DL2P43630 455 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 ZNF133P52736 654 aaPredicted RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 MLF1P58340 268 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 ACTBP60709 375 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 LSM6P62312 80 aaKnown RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 ACTG1P63261 375 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 MAB21L1Q13394 359 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 SNTB2Q13425 540 aaKnown RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 KLF9Q13886 244 aaPredicted RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 SSPNQ14714 243 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 RAB11BQ15907 218 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 HIST3H3Q16695 136 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 SLC36A2Q495M3 483 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 CCDC92Q53HC0 331 aaPredicted RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 C1orf100Q5SVJ3 147 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 TMEM69Q5SWH9 247 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 CD276Q5ZPR3 534 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 RAB12Q6IQ22 244 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 FAM166AQ6J272 317 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 H3F3CQ6NXT2 135 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 JMJD6Q6NYC1 403 aaPredicted RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 ANKRD16Q6P6B7 361 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 KLHL24Q6TFL4 600 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 ARSKQ6UWY0 536 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 IL20RBQ6UXL0 311 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 TMPPEQ6ZT21 453 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 NCCRP1Q6ZVX7 275 aaPredicted RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 SPATC1Q76KD6 591 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 Q7L0L9 218 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 NOXA1Q86UR1 476 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 TMPRSS12Q86WS5 348 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 GHDCQ8N2G8 530 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 PRSS35Q8N3Z0 413 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 FAM109AQ8N4B1 249 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 OR5H6Q8NGV6 325 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 GRPEL2Q8TAA5 225 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 POC1BQ8TC44 478 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 ST7LQ8TDW4 575 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 SMAP2Q8WU79 429 aaPredicted RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 KCNE4Q8WWG9 221 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 ASB13Q8WXK3 278 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 HSD17B8Q92506 261 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 ITFG2Q969R8 447 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 PHF21AQ96BD5 680 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 UPRTQ96BW1 309 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 SLC25A38Q96DW6 304 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 SCMH1Q96GD3 660 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 ARL5BQ96KC2 179 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 IP6K3Q96PC2 410 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 TAAR9Q96RI9 348 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 GFI1Q99684 422 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 KLHDC3Q9BQ90 382 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 NUDT16L1Q9BRJ7 211 aaKnown RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 UQCC2Q9BRT2 126 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 UTP23Q9BRU9 249 aaKnown RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 SF3B5Q9BWJ5 86 aaKnown RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 GTPBP2Q9BX10 602 aaKnown RBP4.95□□□□□ -1.62
PCF11-205ENST00000530906 CACNG6Q9BXT2 260 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 TTTY10Q9BZA0 68 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 MMP28Q9H239 520 aa4.95□□□□□ -1.62
PCF11-205ENST00000530906 C1orf198Q9H425 327 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms