RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 IMPAD1Q9NX62 359 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 SMPD3Q9NY59 655 aaPredicted RBP3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 PTTG3PQ9NZH4 202 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 H2AFY2Q9P0M6 372 aaPredicted RBP3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 MYEF2Q9P2K5 600 aaKnown RBP3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 DUSP13Q9UII6 198 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 FBXL3Q9UKT7 428 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 NDRG4Q9ULP0 352 aaKnown RBP3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 COPS3Q9UNS2 423 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 STARD10Q9Y365 291 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 MPDZO75970 2070 aa3.96□□□□□ -1.77
CHMP4A-202ENST00000524955 RP1L1Q8IWN7 2480 aaPredicted RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 TMEM129A0AVI4 362 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 E9PQ18 207 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 LYNX1G3V0Z9 82 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 CASQ2O14958 399 aaPredicted RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 TBX1O43435 398 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 RRP9O43818 475 aaKnown RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 SMPD2O60906 423 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ATE1O95260 518 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ABHD16AO95870 558 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 CD8AP01732 235 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 RAF1P04049 648 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 LCATP04180 440 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ADRA2AP08913 450 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 LYNX1P0DP58 116 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 HOXB1P14653 301 aaPredicted RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 NR4A1P22736 598 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 TTKP33981 857 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 SLC6A9P48067 706 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 UCP2P55851 309 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 CDC42P60953 191 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 PCBD1P61457 104 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 PPP1CBP62140 327 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 LSM6P62312 80 aaKnown RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 HIST1H3AP68431 136 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 NKX6-1P78426 367 aaPredicted RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ADARB1P78563 741 aaKnown RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 SCRN3Q0VDG4 424 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 RAB35Q15286 201 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 TAF13Q15543 124 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ADIPOQQ15848 244 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 MST1LQ2TV78 715 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 GFOD2Q3B7J2 385 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 SNAI3Q3KNW1 292 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 DMRTC1Q5HYR2 192 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ELFN2Q5R3F8 820 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 HIST2H3PS2Q5TEC6 136 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 NXNL2Q5VZ03 156 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 PAMR1Q6UXH9 720 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 IZUMO2Q6UXV1 221 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 HIST2H3AQ71DI3 136 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 SLC35F2Q8IXU6 374 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 CCDC36Q8IYA8 594 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ALDH16A1Q8IZ83 802 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 OR5AS1Q8N127 324 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 FBXL14Q8N1E6 418 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 MUC15Q8N387 334 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 DHRSXQ8N5I4 330 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF283Q8N7M2 679 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF611Q8N823 705 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 BHLHE23Q8NDY6 225 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF555Q8NEP9 628 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 GJC3Q8NFK1 279 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 OR2AE1Q8NHA4 323 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 SLC25A40Q8TBP6 338 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ST7LQ8TDW4 575 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 TMEM171Q8WVE6 324 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 APH1BQ8WW43 257 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 RNFT2Q96EX2 444 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 HRASLS5Q96KN8 279 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 C4orf45Q96LM5 186 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 SNX18Q96RF0 628 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ATF6BQ99941 703 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 VRK1Q99986 396 aaPredicted RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 USB1Q9BQ65 265 aaKnown RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 COPS4Q9BT78 406 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 CACNG6Q9BXT2 260 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 TEX12Q9BXU0 123 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 MRPL37Q9BZE1 423 aaKnown RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 OR2J1Q9GZK6 312 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 PPP1R3EQ9H7J1 279 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ADGRL4Q9HBW9 690 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 SLCO1C1Q9NYB5 712 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 EIF3KQ9UBQ5 218 aaKnown RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 CYB5R1Q9UHQ9 305 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 ST6GALNAC2Q9UJ37 374 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 GTF2A1LQ9UNN4 478 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 CMAHPQ9Y471 501 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 PCDHGB5Q9Y5G0 923 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 DIDO1Q9BTC0 2240 aaKnown RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 FASNP49327 2511 aaKnown RBP3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 DOPEY1Q5JWR5 2465 aa3.96□□□□□ -1.78
CHMP4A-202ENST00000524955 BAHCC1Q9P281 2608 aa3.95□□□□□ -1.78
CHMP4A-202ENST00000524955 HECTD1Q9ULT8 2610 aa3.95□□□□□ -1.78
CHMP4A-202ENST00000524955 DOPEY2Q9Y3R5 2298 aa3.95□□□□□ -1.78
CHMP4A-202ENST00000524955 FREM1Q5H8C1 2179 aa3.95□□□□□ -1.78
CHMP4A-202ENST00000524955 INTS1Q8N201 2190 aaKnown RBP3.95□□□□□ -1.78
CHMP4A-202ENST00000524955 A0A1W2PPW3 197 aa3.95□□□□□ -1.78
CHMP4A-202ENST00000524955 A0A1W2PQL4 384 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms