RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 POMGNT2Q8NAT1 580 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 OR2T12Q8NG77 320 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 OR9K2Q8NGE7 335 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 OR10A6Q8NH74 314 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 TBC1D15Q8TC07 691 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 SFXN5Q8TD22 340 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 GTF3AQ92664 365 aaKnown RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 RAB8BQ92930 207 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 ZHX1-C8orf76Q96EF9 292 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 NEURL3Q96EH8 262 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 FAM120BQ96EK7 910 aaKnown RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 TSPAN32Q96QS1 320 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 KCTD14Q9BQ13 255 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 CHIAQ9BZP6 476 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 TRIM15Q9C019 465 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 PCDHAC1Q9H158 963 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 PIGUQ9H490 435 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 CRLF2Q9HC73 371 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 MIEF1Q9NQG6 463 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 DUSP22Q9NRW4 184 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 SERINC1Q9NRX5 453 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 TNFRSF19Q9NS68 423 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 SIRT3Q9NTG7 399 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 DCAF13Q9NV06 445 aaKnown RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 TBCCD1Q9NVR7 557 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 NKX1-2Q9UD57 310 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 TRAPPC4Q9Y296 219 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 HDGFL3Q9Y3E1 203 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 LRRC42Q9Y546 428 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 AUP1Q9Y679 476 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 HUWE1Q7Z6Z7 4374 aaKnown RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 NUP214P35658 2090 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-210ENST00000522843 C5orf63A6NC05 138 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 SRRM5B3KS81 715 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 ZNF587BE7ETH6 402 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 H0YJX3 145 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 H3BNH8 94 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 ARPC2O15144 300 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 ANP32DO95626 131 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 CPSF4O95639 269 aaKnown RBP5.54□□□□□ -1.52
SDCBP-210ENST00000522843 C6orf47O95873 294 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 CLPTM1O96005 669 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 UBTFL6P0CB48 400 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-210ENST00000522843 CCNA2P20248 432 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 PAX7P23759 505 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 KDELR2P33947 212 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 GLRXP35754 106 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 MAP2K6P52564 334 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 MTPNP58546 118 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 CTXN1P60606 82 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 SEC61A1P61619 476 aaKnown RBP5.54□□□□□ -1.52
SDCBP-210ENST00000522843 RAB1AP62820 205 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 CCL8P80075 99 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 ARF1P84077 181 aaKnown RBP5.54□□□□□ -1.52
SDCBP-210ENST00000522843 MAPK14Q16539 360 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 DEFB112Q30KQ8 113 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 GTDC1Q4AE62 458 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 PRAMEF8Q5VWM4 474 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 PRAMEF7Q5VXH5 474 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 PAQR6Q6TCH4 344 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 SZRD1Q7Z422 152 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 ANKRD46Q86W74 232 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 PTOV1Q86YD1 416 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 EPHX4Q8IUS5 362 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 OR2C3Q8N628 320 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 RNF148Q8N7C7 305 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 FAM71CQ8NEG0 241 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 OR4A15Q8NGL6 344 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 STMN2Q93045 179 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 SLCO4A1Q96BD0 722 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 STACQ99469 402 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 MS4A7Q9GZW8 240 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-210ENST00000522843 HOXD1Q9GZZ0 328 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 C11orf54Q9H0W9 315 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-210ENST00000522843 MAGIXQ9H6Y5 334 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 MARCH7Q9H992 704 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 BCL2L10Q9HD36 194 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 B3GNT2Q9NY97 397 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 VSX1Q9NZR4 365 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-210ENST00000522843 KLHL21Q9UJP4 597 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 AP4S1Q9Y587 144 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 INSIG2Q9Y5U4 225 aa5.54□□□□□ -1.52
SDCBP-210ENST00000522843 IGHV1-69-2A0A0G2JMI3 117 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 TMEM72A0PK05 275 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 DUXAA6NLW8 204 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 C17orf100A8MU93 164 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 H3BUI4 141 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 CXCR6O00574 342 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 FCMRO60667 390 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 GMNNO75496 209 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 UGT2B17O75795 530 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 KRT36O76013 467 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 AKR7A3O95154 331 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 IGHMP01871 453 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 HLA-HP01893 362 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 OPN1MWP04001 364 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 TFPTP0C1Z6 253 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 OPN1MW2P0DN77 364 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 OPN1MW3P0DN78 364 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 FCGR1AP12314 374 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms