RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 TMEM43Q9BTV4 400 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 WRAP53Q9BUR4 548 aaKnown RBP4.34□□□□□ -1.71
CNOT8-220ENST00000522139 PAPOLGQ9BWT3 736 aaKnown RBP4.34□□□□□ -1.71
CNOT8-220ENST00000522139 ACTR6Q9GZN1 396 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 PCBD2Q9H0N5 130 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 MIXL1Q9H2W2 232 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 PIGUQ9H490 435 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 RANBP3Q9H6Z4 567 aaPredicted RBP4.34□□□□□ -1.71
CNOT8-220ENST00000522139 GPN1Q9HCN4 374 aaPredicted RBP4.34□□□□□ -1.71
CNOT8-220ENST00000522139 SPHK2Q9NRA0 654 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 FAM212BQ9NTI7 297 aaPredicted RBP4.34□□□□□ -1.71
CNOT8-220ENST00000522139 TXNL4BQ9NX01 149 aaKnown RBP4.34□□□□□ -1.71
CNOT8-220ENST00000522139 MARCH5Q9NX47 278 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 GPR83Q9NYM4 423 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 CYB5R1Q9UHQ9 305 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 NUP50Q9UKX7 468 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 TMCC3Q9ULS5 477 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 DUSP12Q9UNI6 340 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 ERVK-19Q9WJR5 959 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 NPTNQ9Y639 398 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 PRSS21Q9Y6M0 314 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 CDH10Q9Y6N8 788 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 U3KQV3 271 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 V9GYQ6 96 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 MYO10Q9HD67 2058 aa4.34□□□□□ -1.71
CNOT8-220ENST00000522139 HELZP42694 1942 aaKnown RBP4.33□□□□□ -1.72
CNOT8-220ENST00000522139 TRBV2A0A0J9YWF9 115 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 FABP12A6NFH5 140 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 MGAT4DA6NG13 374 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 IQCF5A8MTL0 148 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 GPR89AB7ZAQ6 455 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 J3QRE1 110 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 hCG_2039718K7EN88 272 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 FFAR1O14842 300 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 LINC01565O15544 149 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 P2RX6O15547 441 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 PI15O43692 258 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 ORC5O43913 435 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 ZNF780AO75290 641 aaPredicted RBP4.33□□□□□ -1.72
CNOT8-220ENST00000522139 CSO75390 466 aaKnown RBP4.33□□□□□ -1.72
CNOT8-220ENST00000522139 PRAMEF12O95522 483 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 RAB36O95755 333 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 GPR89BP0CG08 455 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 C1GALT1C1LP0DN25 315 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 SPNP16150 400 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 UGT2B7P16662 529 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 TEAD1P28347 426 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 CALCRP30988 508 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 OR1G1P47890 313 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 RRAS2P62070 204 aaPredicted RBP4.33□□□□□ -1.72
CNOT8-220ENST00000522139 LSM3P62310 102 aaKnown RBP4.33□□□□□ -1.72
CNOT8-220ENST00000522139 HBA1P69905 142 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 DHODHQ02127 395 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 TWF1Q12792 350 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 MAB21L1Q13394 359 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 HEPACAMQ14CZ8 416 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 CEBPEQ15744 281 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 FAM189A2Q15884 450 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 C3AR1Q16581 482 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 EXOC3L2Q2M3D2 409 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 HIST2H2AA3Q6FI13 130 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 AGTRAPQ6RW13 159 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 PLET1Q6UQ28 207 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 CASP12Q6UXS9 341 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 RASSF6Q6ZTQ3 369 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 Q6ZVQ6 151 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 LRRC28Q86X40 367 aaPredicted RBP4.33□□□□□ -1.72
CNOT8-220ENST00000522139 SLC7A5P1Q8MH63 180 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 CLDN19Q8N6F1 224 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 GPR26Q8NDV2 337 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 FAM83FQ8NEG4 500 aaPredicted RBP4.33□□□□□ -1.72
CNOT8-220ENST00000522139 ZNF519Q8TB69 540 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 SPPL2AQ8TCT8 520 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 SFXN5Q8TD22 340 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 HAVCR2Q8TDQ0 301 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 CAPSLQ8WWF8 208 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 OTUB2Q96DC9 234 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 CNRIP1Q96F85 164 aaPredicted RBP4.33□□□□□ -1.72
CNOT8-220ENST00000522139 GPR137Q96N19 417 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 CASD1Q96PB1 797 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 OR5M11Q96RB7 305 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 HBEGFQ99075 208 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 P2RY13Q9BPV8 354 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 NIPSNAP1Q9BPW8 284 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 TMEM246Q9BRR3 403 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 ZNF649Q9BS31 505 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 TTYH2Q9BSA4 534 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 SPXQ9BT56 116 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 C11orf49Q9H6J7 331 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 NMNAT1Q9HAN9 279 aaPredicted RBP4.33□□□□□ -1.72
CNOT8-220ENST00000522139 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.33□□□□□ -1.72
CNOT8-220ENST00000522139 PLEK2Q9NYT0 353 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 IL20Q9NYY1 176 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 STMN3Q9NZ72 180 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 STOX2Q9P2F5 926 aaPredicted RBP4.33□□□□□ -1.72
CNOT8-220ENST00000522139 ZNF319Q9P2F9 582 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 EIF3KQ9UBQ5 218 aaKnown RBP4.33□□□□□ -1.72
CNOT8-220ENST00000522139 KCNN3Q9UGI6 736 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 SLC22A14Q9Y267 594 aa4.33□□□□□ -1.72
CNOT8-220ENST00000522139 CAB39Q9Y376 341 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms