RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 MTFP1Q9UDX5 166 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 STEAP1Q9UHE8 339 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 LAMP5Q9UJQ1 280 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 B3GALT1Q9Y5Z6 326 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 KNL1Q8NG31 2342 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 FREM3P0C091 2139 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 SPAG17Q6Q759 2223 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 UNC13CQ8NB66 2214 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 TMED7-TICAM2A0A0A6YYA0 188 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 A0A1B0GVC2 190 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 A0A1B0GVT2 93 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 A0A1B0GX78 115 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 SLC22A23A1A5C7 686 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 ANKUB1A6NFN9 424 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 A6NIN4 97 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 A6NIZ1 184 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 ARGFXA6NJG6 315 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 A6NL46 340 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 LEUTXA8MZ59 168 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 PSMD9O00233 223 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 SLC17A2O00624 439 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 PLPP3O14495 311 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 ABCD4O14678 606 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 LDLRAD4O15165 306 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 ZNF208O43345 1280 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 AKR7A2O43488 359 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 DUX1O43812 170 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 CTAG2O75638 210 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 SLC22A5O76082 557 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 AQP8O94778 261 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 RGS11O94810 467 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 IFNA7P01567 189 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 HRGP04196 525 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 HIST1H2ABP04908 130 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 IFNA4P05014 189 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 S100A8P05109 93 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 ISG15P05161 165 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 S100A9P06702 114 aaKnown RBP4.51□□□□□ -1.69
SDC2-204ENST00000519914 CSF1P09603 554 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 GIMD1P0DJR0 217 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 GABRA1P14867 456 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 CXCL3P19876 107 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 FBLP22087 321 aaKnown RBP4.51□□□□□ -1.69
SDC2-204ENST00000519914 CDK2P24941 298 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 CXCR1P25024 350 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 MPZP25189 248 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 ABCD3P28288 659 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 IL12BP29460 328 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 CRABP1P29762 137 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 DCTDP32321 178 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 FAUP35544 74 aaKnown RBP4.51□□□□□ -1.69
SDC2-204ENST00000519914 CSNK1EP49674 416 aaKnown RBP4.51□□□□□ -1.69
SDC2-204ENST00000519914 CCR6P51684 374 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 SLC26A5P58743 744 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 STARD6P59095 220 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 RAP1BP61224 184 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 RAP1AP62834 184 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 CFHR1Q03591 330 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 PLCXD2Q0VAA5 305 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 MPPED2Q15777 294 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 NNATQ16517 81 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 GXYLT1Q4G148 440 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 TMEM255AQ5JRV8 349 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 WDR38Q5JTN6 314 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 CLLU1Q5K131 121 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 C1orf100Q5SVJ3 147 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 PXDC1Q5TGL8 231 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 STPG1Q5TH74 334 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 C1orf140Q5VVS0 124 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 ZNF626Q68DY1 528 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 ASPHD2Q6ICH7 369 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 SLC18B1Q6NT16 456 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 TEX261Q6UWH6 196 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 NHLRC1Q6VVB1 395 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 ESPNLQ6ZVH7 1005 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 COX15Q7KZN9 410 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 HIST3H2AQ7L7L0 130 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 SLC29A4Q7RTT9 530 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 PRSS45Q7RTY3 260 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 SLC36A1Q7Z2H8 476 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 DPY19L4Q7Z388 723 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 RABEPKQ7Z6M1 372 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 CATSPERDQ86XM0 798 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 ADGRG3Q86Y34 549 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 GLB1L2Q8IW92 636 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 DNAAF1Q8NEP3 725 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 NFAM1Q8NET5 270 aaPredicted RBP4.51□□□□□ -1.69
SDC2-204ENST00000519914 OR11H4Q8NGC9 324 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 OR6N1Q8NGY5 312 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 OR6N2Q8NGY6 317 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 OR1L3Q8NH93 324 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 MFSD8Q8NHS3 518 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 ZNF563Q8TA94 476 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 THEM6Q8WUY1 208 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 SNAPC3Q92966 411 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 HIST1H2ACQ93077 130 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 SLC25A28Q96A46 364 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 PHF21AQ96BD5 680 aa4.51□□□□□ -1.69
SDC2-204ENST00000519914 ZNF501Q96CX3 271 aaPredicted RBP4.51□□□□□ -1.69
SDC2-204ENST00000519914 ZFP3Q96NJ6 502 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms