RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 OR7A2PQ8NGA2 310 aa5.08□□□□□ -1.6
PABPC1-207ENST00000518716 ZNF671Q8TAW3 534 aa5.08□□□□□ -1.6
PABPC1-207ENST00000518716 LRTOMTQ8WZ04 291 aa5.08□□□□□ -1.6
PABPC1-207ENST00000518716 CNOT9Q92600 299 aaKnown RBP5.08□□□□□ -1.6
PABPC1-207ENST00000518716 C16orf92Q96LL3 132 aa5.08□□□□□ -1.6
PABPC1-207ENST00000518716 ALKBH3Q96Q83 286 aaPredicted RBP5.08□□□□□ -1.6
PABPC1-207ENST00000518716 ZNF416Q9BWM5 594 aa5.08□□□□□ -1.6
PABPC1-207ENST00000518716 MMP27Q9H306 513 aa5.08□□□□□ -1.6
PABPC1-207ENST00000518716 NRIP3Q9NQ35 241 aa5.08□□□□□ -1.6
PABPC1-207ENST00000518716 CENPMQ9NSP4 180 aa5.08□□□□□ -1.6
PABPC1-207ENST00000518716 EXD2Q9NVH0 621 aa5.08□□□□□ -1.6
PABPC1-207ENST00000518716 ZDHHC2Q9UIJ5 367 aa5.08□□□□□ -1.6
PABPC1-207ENST00000518716 MRPS7Q9Y2R9 242 aaKnown RBP5.08□□□□□ -1.6
PABPC1-207ENST00000518716 UTP11Q9Y3A2 253 aaKnown RBP5.08□□□□□ -1.6
PABPC1-207ENST00000518716 TMED7Q9Y3B3 224 aa5.08□□□□□ -1.6
PABPC1-207ENST00000518716 GPR45Q9Y5Y3 372 aa5.08□□□□□ -1.6
PABPC1-207ENST00000518716 IGLV3-9A0A075B6K5 115 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 A0A1W2PRV1 198 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 TMEM120BA0PK00 339 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 DUXAA6NLW8 204 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 FTCDNL1E5RQL4 147 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 ZSCAN12O43309 604 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 SCN2BO60939 215 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 RHBDL1O75783 438 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 C6orf47O95873 294 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 KRT8P05787 483 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 TACR3P29371 465 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 RYKP34925 604 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 PSMB10P40306 273 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 MAGEB1P43366 347 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 NAA20P61599 178 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 ROM1Q03395 351 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 CEACAM7Q14002 265 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 IL18Q14116 193 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 MAD2L1BPQ15013 274 aaPredicted RBP5.07□□□□□ -1.6
PABPC1-207ENST00000518716 DCAF12L2Q5VW00 463 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 LIPMQ5VYY2 423 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 SAXO2Q658L1 398 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 LEG1Q6P5S2 330 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 FRRS1Q6ZNA5 592 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 C9orf139Q6ZV77 190 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 C6orf120Q7Z4R8 191 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 ARMC8Q8IUR7 673 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 CPOQ8IVL8 374 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 CCDC36Q8IYA8 594 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 TMEM123Q8N131 208 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 NATD1Q8N6N6 113 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 DTX3Q8N9I9 347 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 BHLHE23Q8NDY6 225 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 CAPSLQ8WWF8 208 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 POP5Q969H6 163 aaKnown RBP5.07□□□□□ -1.6
PABPC1-207ENST00000518716 MUL1Q969V5 352 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 VPS33AQ96AX1 596 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 MOAP1Q96BY2 351 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 DDIT4LQ96D03 193 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 RAB39BQ96DA2 213 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 DUX5Q96PT3 197 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 NAPGQ99747 312 aaPredicted RBP5.07□□□□□ -1.6
PABPC1-207ENST00000518716 PKIBQ9C010 78 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 PRDM13Q9H4Q3 707 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 GPR35Q9HC97 309 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 DECR2Q9NUI1 292 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 NDE1Q9NXR1 346 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 PLEK2Q9NYT0 353 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 ZNF224Q9NZL3 707 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 SELENONQ9NZV5 590 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 B3GAT1Q9P2W7 334 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 NUP50Q9UKX7 468 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.07□□□□□ -1.6
PABPC1-207ENST00000518716 DNAJC15Q9Y5T4 150 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 LYVE1Q9Y5Y7 322 aa5.07□□□□□ -1.6
PABPC1-207ENST00000518716 LOC102725191A0A1B0GVB3 256 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 AGAP5A6NIR3 686 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 C17orf100A8MU93 164 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 TRAPPC2LH3BP13 241 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 WRBO00258 174 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 NDUFA2O43678 99 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 SPDEFO95238 335 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 CRYZL1O95825 349 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 MPIG6BO95866 241 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 HLA-HP01893 362 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 GPIP06744 558 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 GSTA1P08263 222 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 LINC00032P0C843 101 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 HSMCR30P0CW71 290 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 ZNF250P15622 560 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 MATN1P21941 496 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 RPS4Y1P22090 263 aaKnown RBP5.06□□□□□ -1.6
PABPC1-207ENST00000518716 ECHS1P30084 290 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 SLC9A3P48764 834 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 KRTAP10-11P60412 298 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 C2orf54Q08AI8 447 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 PTGR1Q14914 329 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 OR7A5Q15622 319 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 GSTA3Q16772 222 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 GPAT3Q53EU6 434 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 ZNF311Q5JNZ3 666 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 PHYHD1Q5SRE7 291 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 AVPI1Q5T686 147 aa5.06□□□□□ -1.6
PABPC1-207ENST00000518716 KPRPQ5T749 579 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms