RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 WACQ9BTA9 647 aa9.55□□□□□ -0.88
TRAPPC9-203ENST00000517667 TRIM15Q9C019 465 aa9.55□□□□□ -0.88
TRAPPC9-203ENST00000517667 FAM107BQ9H098 131 aa9.55□□□□□ -0.88
TRAPPC9-203ENST00000517667 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.55□□□□□ -0.881e-8■■■■■ 54.8
TRAPPC9-203ENST00000517667 SLC25A37Q9NYZ2 338 aa9.55□□□□□ -0.88
TRAPPC9-203ENST00000517667 SLC7A7Q9UM01 511 aa9.55□□□□□ -0.88
TRAPPC9-203ENST00000517667 ANGPT4Q9Y264 503 aa9.55□□□□□ -0.88
TRAPPC9-203ENST00000517667 P2RY10O00398 339 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 COX5BP10606 129 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 THRBP10828 461 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 LAP3P28838 519 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 RBMXP38159 391 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 SRP9P49458 86 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 NPY4RP50391 375 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 FMODQ06828 376 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 NPTX1Q15818 432 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 ARMC4Q5T2S8 1044 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 RUSC1-AS1Q66K80 236 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 Q6ZPA2 131 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 ATG16L2Q8NAA4 619 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 SMYD1Q8NB12 490 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 CCDC197Q8NCU1 140 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 OR6T1Q8NGN1 323 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 LRTOMTQ8WZ04 291 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 NSMAFQ92636 917 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 HAVCR1Q96D42 359 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 NMD3Q96D46 503 aaKnown RBP9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 CMBLQ96DG6 245 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 PCGF1Q9BSM1 259 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 ALG12Q9BV10 488 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 ACOXLQ9NUZ1 547 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 THAP1Q9NVV9 213 aa9.54□□□□□ -0.88
TRAPPC9-203ENST00000517667 C12orf71A8MTZ7 269 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 EVPLLA8MZ36 301 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 ZNF879B4DU55 563 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 G3V4G9 280 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 J3QW42 95 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 TOX4O94842 621 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 LYPD3O95274 346 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 CYB5R3P00387 301 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 IGF2P01344 180 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 MT-ND1P03886 318 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 THY1P04216 161 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 LIPFP07098 398 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 KITP10721 976 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 GPX2P18283 190 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 WDR4P57081 412 aaKnown RBP9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 DUSP7Q16829 419 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 CD276Q5ZPR3 534 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 WDR25Q64LD2 544 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 SLC25A47Q6Q0C1 308 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 DCDC5Q6ZRR9 648 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 LDLRAD3Q86YD5 345 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 MSRB3Q8IXL7 192 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 C10orf111Q8N326 155 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 ZSCAN4Q8NAM6 433 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 OR13G1Q8NGZ3 307 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 ZNF420Q8TAQ5 688 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 C10orf82Q8WW14 230 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 HDAC2Q92769 488 aaKnown RBP9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 PTP4A1Q93096 173 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 MEGF10Q96KG7 1140 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 RBP7Q96R05 134 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 PCDHAC1Q9H158 963 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 DPAGT1Q9H3H5 408 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 TXNIPQ9H3M7 391 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 C16orf95Q9H693 158 aa9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 MEPEQ9NQ76 525 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC9-203ENST00000517667 IGKV1D-43A0A0B4J1Z2 117 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 CENPVL3A0A0U1RRI6 287 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 PIP5K1CO60331 668 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 SNNO75324 88 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 ZNF205O95201 554 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 OPN1MWP04001 364 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 OPN1MW2P0DN77 364 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 OPN1MW3P0DN78 364 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 RAC2P15153 192 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 FUT1P19526 365 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 CD247P20963 164 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 MSR1P21757 451 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 CFHR2P36980 270 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 AQP2P41181 271 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 RBM34P42696 430 aaKnown RBP9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 IER3P46695 156 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 HTR5AP47898 357 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 PCBP3P57721 371 aaKnown RBP9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 STX1BP61266 288 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 SCRN3Q0VDG4 424 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 MPP2Q14168 576 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 FAM189A2Q15884 450 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 ZSCAN26Q16670 478 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 SAMD5Q5TGI4 173 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 FOXL2NBQ6ZUU3 175 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 C11orf65Q8NCR3 313 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 OR10AD1Q8NGE0 317 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 PPP1R14AQ96A00 147 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 C7orf26Q96N11 449 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 CDADC1Q9BWV3 514 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 POFUT1Q9H488 388 aa9.52□□□□□ -0.89
TRAPPC9-203ENST00000517667 FGFR1OP2Q9NVK5 253 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms