RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 GPAA1O43292 621 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 HCRTR1O43613 425 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 MGRN1O60291 552 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 HSBP1O75506 76 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 CLPXO76031 633 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 IFNW1P05000 195 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 KLK3P07288 261 aaPredicted RBP2.33□□□□□ -2.04
HERC4-215ENST00000515753 GIG44P09565 113 aaPredicted RBP2.33□□□□□ -2.04
HERC4-215ENST00000515753 HSPD1P10809 573 aaKnown RBP2.33□□□□□ -2.04
HERC4-215ENST00000515753 CCNOP22674 350 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 SHMT2P34897 504 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 UGT1A3P35503 534 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 SLC1A2P43004 574 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 KIR2DS4P43632 304 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 GPR4P46093 362 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 GPM6AP51674 278 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 UGT2B15P54855 530 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 PSMD4P55036 377 aaKnown RBP2.33□□□□□ -2.04
HERC4-215ENST00000515753 BIDP55957 195 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 ERVPABLB-1P60509 514 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 LYZP61626 148 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 XIAPP98170 497 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 PAX2Q02962 417 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 RCAN2Q14206 197 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 TIMM50Q3ZCQ8 353 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 FHL5Q5TD97 284 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 PDPK2PQ6A1A2 396 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 ERICH5Q6P6B1 374 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 TRIM40Q6P9F5 258 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 DEGS2Q6QHC5 323 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 WDR74Q6RFH5 385 aaPredicted RBP2.33□□□□□ -2.04
HERC4-215ENST00000515753 ACOT7LQ6ZUV0 252 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 ARCQ7LC44 396 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 ASCL5Q7RTU5 278 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 FAM122BQ7Z309 247 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 DEFB128Q7Z7B8 93 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 CMC1Q7Z7K0 106 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 TMEM135Q86UB9 458 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 PPP1R27Q86WC6 154 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 EID2Q8N6I1 236 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 CD177Q8N6Q3 437 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 CCDC71LQ8N9Z2 235 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 FBXO36Q8NEA4 188 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 OR51L1Q8NGJ5 315 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 OR2A12Q8NGT7 310 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 OR52E5Q8NH55 327 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 PIH1D2Q8WWB5 315 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 CAPSLQ8WWF8 208 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 ASZ1Q8WWH4 475 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 MS4A4EQ96PG1 132 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 RANBP9Q96S59 729 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 KCNS3Q9BQ31 491 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 KLHDC3Q9BQ90 382 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 UCK2Q9BZX2 261 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 ACTR3CQ9C0K3 210 aaPredicted RBP2.33□□□□□ -2.04
HERC4-215ENST00000515753 OR2AG1Q9H205 316 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 GBA3Q9H227 469 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 SYNDIG1Q9H7V2 258 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 LY9Q9HBG7 655 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 CSNK1G1Q9HCP0 422 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 HRASLS2Q9NWW9 162 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 CCDC59Q9P031 241 aaKnown RBP2.33□□□□□ -2.04
HERC4-215ENST00000515753 ADAM22Q9P0K1 906 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 FLVCR2Q9UPI3 526 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 COL4A4P53420 1690 aaPredicted RBP2.33□□□□□ -2.04
HERC4-215ENST00000515753 ABCB11O95342 1321 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 PSME4Q14997 1843 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 PDE4DIPQ5VU43 2346 aa2.33□□□□□ -2.04
HERC4-215ENST00000515753 CENPXA8MT69 81 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 A8MUA0 341 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 A8MX80 341 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 RSPH10B2B2RC85 870 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 C5orf67F2Z3F1 127 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 M0QZ92 97 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 PPP1R2P9O14990 202 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 SIVA1O15304 175 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 RRP8O43159 456 aaKnown RBP2.32□□□□□ -2.04
HERC4-215ENST00000515753 FARS2O95363 451 aaKnown RBP2.32□□□□□ -2.04
HERC4-215ENST00000515753 ETHE1O95571 254 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 PIGRP01833 764 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 FGGP02679 453 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 RSPH10BP0C881 870 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 CCL2P13500 99 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 IGLL1P15814 213 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 TCN1P20061 433 aaPredicted RBP2.32□□□□□ -2.04
HERC4-215ENST00000515753 PMCHP20382 165 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 NTSP30990 170 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 PSMC5P62195 406 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 LCN2P80188 198 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 ZNF33AQ06730 810 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 ALX1Q15699 326 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 NSUN5P1Q3KNT7 163 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 SOHLH1Q5JUK2 328 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 VAX1Q5SQQ9 334 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 MARCH8Q5T0T0 291 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 GPR157Q5UAW9 335 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 GPR107Q5VW38 600 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 CLEC6AQ6EIG7 209 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 C2orf66Q6UXQ4 117 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 PEX26Q7Z412 305 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms