RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 KCTD18Q6PI47 426 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 DCXRQ7Z4W1 244 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 ALDH16A1Q8IZ83 802 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF786Q8N393 782 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF540Q8NDQ6 660 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 OR4F15Q8NGB8 312 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 OR10S1Q8NGN2 331 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 OR52N5Q8NH56 324 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 HTRA1Q92743 480 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 MYDGFQ969H8 173 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 TMEM80Q96HE8 168 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 DACH2Q96NX9 599 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 NR1H4Q96RI1 486 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 COQ7Q99807 217 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF649Q9BS31 505 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 ABHD6Q9BV23 337 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 CDCA4Q9BXL8 241 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 WNT5BQ9H1J7 359 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 NOX3Q9HBY0 568 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 LAMP5Q9UJQ1 280 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 MYRFQ9Y2G1 1151 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 POLR1DQ9Y2S0 133 aa10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 EXOSC1Q9Y3B2 195 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-220ENST00000514830 HEATR1Q9H583 2144 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 A0A1W2PQL4 384 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF878C9JN71 531 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF670-ZNF695F2Z2N8 137 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 RER1O15258 196 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF254O75437 659 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 SULT1C4O75897 302 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 GOSR1O95249 250 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 CDK1P06493 297 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 MRPL3P09001 348 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 LIMS3P0CW19 117 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 LIMS4P0CW20 117 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 RNF224P0DH78 156 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 CD79AP11912 226 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 CRYGSP22914 178 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 GRNP28799 593 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 OPRL1P41146 370 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 CHN2P52757 468 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 PLP2Q04941 152 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 EIF2B1Q14232 305 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 GALEQ14376 348 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 CDONQ4KMG0 1287 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 PABPC1L2AQ5JQF8 200 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 CFAP77Q6ZQR2 320 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 C22orf34Q6ZV56 151 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 VASH1Q7L8A9 365 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 KCTD20Q7Z5Y7 419 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 MDP1Q86V88 176 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 LINC00346Q8IVM7 164 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 SYS1Q8N2H4 156 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 IL17RDQ8NFM7 739 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 SLAMF6Q96DU3 332 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 MRPL48Q96GC5 212 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 WFIKKN1Q96NZ8 548 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 DCLRE1CQ96SD1 692 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 RHNO1Q9BSD3 238 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 COPS4Q9BT78 406 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 NIPAL2Q9H841 368 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 NGBQ9NPG2 151 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 PAK1IP1Q9NWT1 392 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 ERVK13-1Q9NX77 482 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 COPS3Q9UNS2 423 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 KLHDC2Q9Y2U9 406 aa10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 UTP20O75691 2785 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-220ENST00000514830 IQCMA0A1B0GVH7 501 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 TMEM129A0AVI4 362 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 TUBAL3A6NHL2 446 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 DOK2O60496 412 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 TNFAIP8O95379 198 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 PATE4P0C8F1 98 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 RPS27P42677 84 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 CAPZA2P47755 286 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 ACTA2P62736 377 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 GRB2P62993 217 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 ACTG2P63267 376 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF85Q03923 595 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 IRF3Q14653 427 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 CORO6Q6QEF8 472 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF322Q6U7Q0 402 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 PLEKHG7Q6ZR37 379 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 AHSA2Q719I0 299 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 PRSS48Q7RTY5 328 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF584Q8IVC4 421 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 DMRTC2Q8IXT2 367 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF679Q8IYX0 411 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 STX19Q8N4C7 294 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 CPEB3Q8NE35 698 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 OR10H4Q8NGA5 316 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 OR1J2Q8NGS2 313 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 OR1F12Q8NHA8 337 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 HAVCR2Q8TDQ0 301 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 FAM222BQ8WU58 562 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 OR8B4Q96RC9 309 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 AMELYQ99218 206 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 ATF6BQ99941 703 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 SPOCK3Q9BQ16 436 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 MED18Q9BUE0 208 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms