RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 C10orf53Q8N6V4 93 aa2.59□□□□□ -2
CHD1-211ENST00000514344 ZNF566Q969W8 418 aa2.59□□□□□ -2
CHD1-211ENST00000514344 PPP1R36Q96LQ0 422 aa2.59□□□□□ -2
CHD1-211ENST00000514344 ZNF347Q96SE7 839 aa2.59□□□□□ -2
CHD1-211ENST00000514344 ZNF607Q96SK3 696 aa2.59□□□□□ -2
CHD1-211ENST00000514344 P2RX4Q99571 388 aa2.59□□□□□ -2
CHD1-211ENST00000514344 CCT7Q99832 543 aa2.59□□□□□ -2
CHD1-211ENST00000514344 SPATA9Q9BWV2 254 aa2.59□□□□□ -2
CHD1-211ENST00000514344 KCNN2Q9H2S1 579 aa2.59□□□□□ -2
CHD1-211ENST00000514344 WDR76Q9H967 626 aa2.59□□□□□ -2
CHD1-211ENST00000514344 ELOVL3Q9HB03 270 aa2.59□□□□□ -2
CHD1-211ENST00000514344 KCNK9Q9NPC2 374 aa2.59□□□□□ -2
CHD1-211ENST00000514344 RRAGDQ9NQL2 400 aaPredicted RBP2.59□□□□□ -2
CHD1-211ENST00000514344 KIAA1456Q9P272 454 aa2.59□□□□□ -2
CHD1-211ENST00000514344 TBK1Q9UHD2 729 aa2.59□□□□□ -2
CHD1-211ENST00000514344 TCF19Q9Y242 345 aa2.59□□□□□ -2
CHD1-211ENST00000514344 E7ESA3 106 aa2.58□□□□□ -2
CHD1-211ENST00000514344 PGRMC1O00264 195 aaKnown RBP2.58□□□□□ -2
CHD1-211ENST00000514344 ENTPD5O75356 428 aa2.58□□□□□ -2
CHD1-211ENST00000514344 C1QCP02747 245 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ALDOBP05062 364 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SERPINE1P05121 402 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SBK3P0C264 359 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ADORA3P0DMS8 318 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ARRB2P32121 409 aa2.58□□□□□ -2
CHD1-211ENST00000514344 CEBPDP49716 269 aaPredicted RBP2.58□□□□□ -2
CHD1-211ENST00000514344 MAB21L1Q13394 359 aa2.58□□□□□ -2
CHD1-211ENST00000514344 PMS2P11Q13670 270 aa2.58□□□□□ -2
CHD1-211ENST00000514344 KCNJ8Q15842 424 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SGCAQ16586 387 aa2.58□□□□□ -2
CHD1-211ENST00000514344 GSTA3Q16772 222 aa2.58□□□□□ -2
CHD1-211ENST00000514344 CLEC12AQ5QGZ9 265 aa2.58□□□□□ -2
CHD1-211ENST00000514344 OR2W3Q7Z3T1 314 aa2.58□□□□□ -2
CHD1-211ENST00000514344 LHFPL4Q7Z7J7 247 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SERPINA11Q86U17 422 aa2.58□□□□□ -2
CHD1-211ENST00000514344 FAM90A1Q86YD7 464 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ALDH16A1Q8IZ83 802 aa2.58□□□□□ -2
CHD1-211ENST00000514344 KRTCAP2Q8N6L1 136 aa2.58□□□□□ -2
CHD1-211ENST00000514344 OR52H1Q8NGJ2 320 aa2.58□□□□□ -2
CHD1-211ENST00000514344 OR13G1Q8NGZ3 307 aa2.58□□□□□ -2
CHD1-211ENST00000514344 FAM76AQ8TAV0 307 aa2.58□□□□□ -2
CHD1-211ENST00000514344 STK35Q8TDR2 534 aa2.58□□□□□ -2
CHD1-211ENST00000514344 OR5P2Q8WZ92 322 aa2.58□□□□□ -2
CHD1-211ENST00000514344 FAM46AQ96IP4 442 aaKnown RBP2.58□□□□□ -2
CHD1-211ENST00000514344 MOGAT1Q96PD6 335 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ST6GALNAC5Q9BVH7 336 aa2.58□□□□□ -2
CHD1-211ENST00000514344 MRPL46Q9H2W6 279 aaKnown RBP2.58□□□□□ -2
CHD1-211ENST00000514344 RETNQ9HD89 108 aa2.58□□□□□ -2
CHD1-211ENST00000514344 TRIM36Q9NQ86 728 aa2.58□□□□□ -2
CHD1-211ENST00000514344 C1orf109Q9NX04 203 aa2.58□□□□□ -2
CHD1-211ENST00000514344 STARD10Q9Y365 291 aa2.58□□□□□ -2
CHD1-211ENST00000514344 A0A096LPI6 279 aa2.58□□□□□ -2
CHD1-211ENST00000514344 A0A1W2PQ09 198 aa2.58□□□□□ -2
CHD1-211ENST00000514344 TRIM64CA6NLI5 447 aa2.58□□□□□ -2
CHD1-211ENST00000514344 FAAHO00519 579 aa2.58□□□□□ -2
CHD1-211ENST00000514344 LDLRAD4O15165 306 aa2.58□□□□□ -2
CHD1-211ENST00000514344 OR2T1O43869 369 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SLC2A10O95528 541 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ECDO95905 644 aaPredicted RBP2.58□□□□□ -2
CHD1-211ENST00000514344 ENO1P06733 434 aaKnown RBP2.58□□□□□ -2
CHD1-211ENST00000514344 SNRPAP09012 282 aaKnown RBP2.58□□□□□ -2
CHD1-211ENST00000514344 SELLP14151 372 aa2.58□□□□□ -2
CHD1-211ENST00000514344 KITLGP21583 273 aa2.58□□□□□ -2
CHD1-211ENST00000514344 FPR3P25089 353 aa2.58□□□□□ -2
CHD1-211ENST00000514344 HPCAL1P37235 193 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SERPINB8P50452 374 aa2.58□□□□□ -2
CHD1-211ENST00000514344 PLTPP55058 493 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SLC7A5Q01650 507 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SSX2Q16385 188 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ZNF181Q2M3W8 571 aa2.58□□□□□ -2
CHD1-211ENST00000514344 LSM12Q3MHD2 195 aaKnown RBP2.58□□□□□ -2
CHD1-211ENST00000514344 ABCA11PQ4W5N1 156 aa2.58□□□□□ -2
CHD1-211ENST00000514344 INTS11Q5TA45 600 aaKnown RBP2.58□□□□□ -2
CHD1-211ENST00000514344 AP1ARQ63HQ0 302 aa2.58□□□□□ -2
CHD1-211ENST00000514344 CCDC91Q7Z6B0 441 aa2.58□□□□□ -2
CHD1-211ENST00000514344 RANBP3LQ86VV4 465 aaPredicted RBP2.58□□□□□ -2
CHD1-211ENST00000514344 DYNAPQ8N1N2 210 aa2.58□□□□□ -2
CHD1-211ENST00000514344 FAM216BQ8N7L0 139 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ANKFN1Q8N957 763 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ZNF511Q8NB15 262 aa2.58□□□□□ -2
CHD1-211ENST00000514344 OR11L1Q8NGX0 322 aa2.58□□□□□ -2
CHD1-211ENST00000514344 OR2T11Q8NH01 316 aa2.58□□□□□ -2
CHD1-211ENST00000514344 OR6S1Q8NH40 331 aa2.58□□□□□ -2
CHD1-211ENST00000514344 PSMA8Q8TAA3 256 aa2.58□□□□□ -2
CHD1-211ENST00000514344 IL17DQ8TAD2 202 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SFXN5Q8TD22 340 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SLC7A6Q92536 515 aa2.58□□□□□ -2
CHD1-211ENST00000514344 MCHR2Q969V1 340 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ZNF764Q96H86 408 aaPredicted RBP2.58□□□□□ -2
CHD1-211ENST00000514344 ZNF582Q96NG8 517 aaPredicted RBP2.58□□□□□ -2
CHD1-211ENST00000514344 CCL13Q99616 98 aa2.58□□□□□ -2
CHD1-211ENST00000514344 MRPL57Q9BQC6 102 aaKnown RBP2.58□□□□□ -2
CHD1-211ENST00000514344 C1QTNF3Q9BXJ4 246 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SLC38A1Q9H2H9 487 aa2.58□□□□□ -2
CHD1-211ENST00000514344 METTL8Q9H825 291 aaKnown RBP2.58□□□□□ -2
CHD1-211ENST00000514344 ABCB10Q9NRK6 738 aa2.58□□□□□ -2
CHD1-211ENST00000514344 TBCCD1Q9NVR7 557 aa2.58□□□□□ -2
CHD1-211ENST00000514344 MRPL15Q9P015 296 aaKnown RBP2.58□□□□□ -2
CHD1-211ENST00000514344 TMCO1Q9UM00 188 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SF3B6Q9Y3B4 125 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms