RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SCAND1P57086 179 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 LSM6P62312 80 aaKnown RBP13.23□□□□□ -0.29
VCAN-211ENST00000513984 TGIF1Q15583 401 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 TMEM244Q5VVB8 128 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 ASPHD2Q6ICH7 369 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 KLHL24Q6TFL4 600 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 GALNT16Q8N428 558 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 MDS2Q8NDY4 140 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 NIPAL2Q9H841 368 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 PLA2G3Q9NZ20 509 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 FOXJ3Q9UPW0 622 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 RCE1Q9Y256 329 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 FLVCR1Q9Y5Y0 555 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 LOC107986453A0A1B0GWG9 222 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 ZNF716A6NP11 495 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 MAS1P04201 325 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 HNRNPCP07910 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
VCAN-211ENST00000513984 CSRP1P21291 193 aaKnown RBP13.23□□□□□ -0.29
VCAN-211ENST00000513984 SELENOPP49908 381 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 SOX8P57073 446 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 BCL2L15Q5TBC7 163 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 ATP1A1-AS1Q5TC04 95 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 C20orf196Q8IYI0 205 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 UBQLNLQ8IYU4 475 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 TRIM63Q969Q1 353 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 SLC25A38Q96DW6 304 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 NEDD4LQ96PU5 975 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 ABHD1Q96SE0 405 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 TTTY12Q9BZ98 90 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 NELFAQ9H3P2 528 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 PNRC2Q9NPJ4 139 aaKnown RBP13.23□□□□□ -0.29
VCAN-211ENST00000513984 RABL2AQ9UBK7 228 aaPredicted RBP13.23□□□□□ -0.29
VCAN-211ENST00000513984 ASH2LQ9UBL3 628 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 CLEC4AQ9UMR7 237 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 RABL2BQ9UNT1 228 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 ETV7Q9Y603 341 aa13.23□□□□□ -0.29
VCAN-211ENST00000513984 DNAJC13O75165 2243 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 A0A1B0GVC2 190 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 LINC00854A0A1B0GVQ3 168 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 A6NIN4 97 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 DHHO43323 396 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 NME2P1O60361 137 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 LIPCP11150 499 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 IGFBP3P17936 291 aaPredicted RBP13.22□□□□□ -0.29
VCAN-211ENST00000513984 MSR1P21757 451 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 NME2P22392 152 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 PSMA6P60900 246 aaKnown RBP13.22□□□□□ -0.29
VCAN-211ENST00000513984 CELF2-AS1Q8N7Q2 184 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 DNAAF1Q8NEP3 725 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 CPNE4Q96A23 557 aaPredicted RBP13.22□□□□□ -0.29
VCAN-211ENST00000513984 NABP1Q96AH0 204 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 ABCG5Q9H222 651 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 MOB1AQ9H8S9 216 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 OR5V1Q9UGF6 321 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 CAMK2AQ9UQM7 478 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 KLF13Q9Y2Y9 288 aaPredicted RBP13.22□□□□□ -0.29
VCAN-211ENST00000513984 CNOT1A5YKK6 2376 aaKnown RBP13.22□□□□□ -0.29
VCAN-211ENST00000513984 ZNF407Q9C0G0 2248 aa13.22□□□□□ -0.29
VCAN-211ENST00000513984 OR5H15A6NDH6 313 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 TTRP02766 147 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 SP1P08047 785 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 RRADP55042 308 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 CLDN12P56749 244 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 PITPNAQ00169 270 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 PDSS1Q5T2R2 415 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 HACD4Q5VWC8 232 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 ELMOD2Q8IZ81 293 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 CMTM4Q8IZR5 234 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 DTX3Q8N9I9 347 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 RFT1Q96AA3 541 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 ZC3HAV1LQ96H79 300 aaKnown RBP13.21□□□□□ -0.29
VCAN-211ENST00000513984 ZNF416Q9BWM5 594 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 STEAP1Q9UHE8 339 aa13.21□□□□□ -0.29
VCAN-211ENST00000513984 NUFIP1Q9UHK0 495 aaKnown RBP13.21□□□□□ -0.29
VCAN-211ENST00000513984 ARGFXA6NJG6 315 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 CTDSPLO15194 276 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 RER1O15258 196 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 CYTIPO60759 359 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 GLSO94925 669 aaPredicted RBP13.2□□□□□ -0.3
VCAN-211ENST00000513984 ACSM4P0C7M7 580 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 PRKAR1AP10644 381 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 CD37P11049 281 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 RFC3P40938 356 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 GUCA1AP43080 201 aaPredicted RBP13.2□□□□□ -0.3
VCAN-211ENST00000513984 MAP2K3P46734 347 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 LHX2P50458 406 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 MMP15P51511 669 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 HYAL4Q2M3T9 481 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 SLC25A25Q6KCM7 469 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 FCRLAQ7L513 359 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 OR13C3Q8NGS6 347 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 RAB40AQ8WXH6 277 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 ROBO4Q8WZ75 1007 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 AGAP4Q96P64 663 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 THAP7Q9BT49 309 aaPredicted RBP13.2□□□□□ -0.3
VCAN-211ENST00000513984 ULBP2Q9BZM5 246 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 PBOV1Q9GZY1 135 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 RBFOX1Q9NWB1 397 aaKnown RBP13.2□□□□□ -0.3
VCAN-211ENST00000513984 CKLFQ9UBR5 152 aa13.2□□□□□ -0.3
VCAN-211ENST00000513984 P2RY10O00398 339 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms