RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 SLC3A1Q07837 685 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 DOC2BQ14184 412 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 MFSD13AQ14CX5 517 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 LARS2Q15031 903 aaKnown RBP7.59□□□□□ -1.2
NUP54-211ENST00000512151 TMEM155Q4W5P6 130 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 ESCO2Q56NI9 601 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 FAM209AQ5JX71 171 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 CARD17Q5XLA6 110 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 ZNF627Q7L945 461 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 TSPYL5Q86VY4 417 aaPredicted RBP7.59□□□□□ -1.2
NUP54-211ENST00000512151 KLHL36Q8N4N3 616 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 SPICQ8N5J4 248 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 VANGL1Q8TAA9 524 aaPredicted RBP7.59□□□□□ -1.2
NUP54-211ENST00000512151 ZNF519Q8TB69 540 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 SLC26A7Q8TE54 656 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 RAB40AQ8WXH6 277 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 CFHR4Q92496 578 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 TPD52L3Q96J77 140 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 SPATA5L1Q9BVQ7 753 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 MUC13Q9H3R2 512 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 V9GYQ6 96 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 TCRBV3S1A0A5B6 114 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 CEACAM18A8MTB9 384 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 FTCDNL1E5RQL4 147 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 CASQ2O14958 399 aaPredicted RBP7.58□□□□□ -1.2
NUP54-211ENST00000512151 XPNPEP2O43895 674 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 IGHV3-13P01766 116 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 MT-ND5P03915 603 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 SERPINA5P05154 406 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 SFTPBP07988 381 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 WNT2P09544 360 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 PNMTP11086 282 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 HTR2AP28223 471 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 MPV17P39210 176 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 IER3P46695 156 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 EPS8Q12929 822 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 GPR157Q5UAW9 335 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 C1orf140Q5VVS0 124 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 BTNL3Q6UXE8 466 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 Q6ZTK2 550 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 C20orf196Q8IYI0 205 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 ADGRG5Q8IZF4 528 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 ICA1LQ8NDH6 482 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 SLC30A7Q8NEW0 376 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 OR6T1Q8NGN1 323 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 TBC1D15Q8TC07 691 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 C11orf40Q8WZ69 217 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 SLCO4A1Q96BD0 722 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 PYURFQ96I23 114 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 HSH2DQ96JZ2 352 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 C7orf34Q96L11 122 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 SIGLEC11Q96RL6 698 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 B9D2Q9BPU9 175 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 PTDSS2Q9BVG9 487 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 TAPBPLQ9BX59 468 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 MMP28Q9H239 520 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 BATF3Q9NR55 127 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 TMEM106BQ9NUM4 274 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 RPS6KA6Q9UK32 745 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 SH3GLB1Q9Y371 365 aa7.58□□□□□ -1.2
NUP54-211ENST00000512151 LCE6AA0A183 80 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 KIR2DS1A0A191URI9 304 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 AQP12BA6NM10 295 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 H3BNX3 289 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 J3KTA2 159 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 NPIPB7O75200 414 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 GMNNO75496 209 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 LYPD3O95274 346 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 IFNA14P01570 189 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 THY1P04216 161 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 IGLL1P15814 213 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 ZNF43P17038 809 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 UCP2P55851 309 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 BTG1P62324 171 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 FLOT2Q14254 428 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 IFI44LQ53G44 452 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 CASC10Q5T4H9 136 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 ZFP1Q6P2D0 407 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 SKA3Q8IX90 412 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 AQP12AQ8IXF9 295 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 MUC20Q8N307 709 aaPredicted RBP7.57□□□□□ -1.2
NUP54-211ENST00000512151 ZNF283Q8N7M2 679 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 PIK3C3Q8NEB9 887 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 CANT1Q8WVQ1 401 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 RASSF5Q8WWW0 418 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 PYDC1Q8WXC3 89 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 LRGUKQ96M69 825 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 SEPHS2Q99611 448 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 ZNF184Q99676 751 aaPredicted RBP7.57□□□□□ -1.2
NUP54-211ENST00000512151 SSBP3Q9BWW4 388 aaPredicted RBP7.57□□□□□ -1.2
NUP54-211ENST00000512151 VCX3BQ9H321 246 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 BAG5Q9UL15 447 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 SAMD4AQ9UPU9 718 aaKnown RBP7.57□□□□□ -1.2
NUP54-211ENST00000512151 LRCH1Q9Y2L9 728 aa7.57□□□□□ -1.2
NUP54-211ENST00000512151 A0A0U1RQK1 487 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 CENPVL3A0A0U1RRI6 287 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 A8MVM7 634 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 FAAHO00519 579 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 FFAR1O14842 300 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 DIRAS1O95057 198 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms