RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 EGLN1Q9GZT9 426 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 OR52A5Q9H2C5 316 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 BRF2Q9HAW0 419 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 PLEKHA1Q9HB21 404 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 ADARB2Q9NS39 739 aaKnown RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 FRRS1LQ9P0K9 344 aa6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 LSM5Q9Y4Y9 91 aaKnown RBP6.56□□□□□ -1.36
LIMCH1-207ENST00000508466 TRBV5-4A0A0C4DH59 114 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 A0A1B0GUS0 222 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 SMCO3A2RU48 225 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 CDRT15L2A8MXV6 281 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 MCIDASD6RGH6 385 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 XRCC2O43543 280 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 LMX1BO60663 402 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 UGDHO60701 494 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 WNT11O96014 354 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 IFNA10P01566 189 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 CTSLP07711 333 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 HRH1P35367 487 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 CD96P40200 585 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 CRYBB1P53674 252 aaPredicted RBP6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 CCL14Q16627 93 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 GLYATL3Q5SZD4 288 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 HENMT1Q5T8I9 393 aaKnown RBP6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 TCEAL6Q6IPX3 200 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 NXPE4Q6UWF7 544 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 OVCH1Q7RTY7 1134 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 HIST3H2BBQ8N257 126 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 TMEM239Q8WW34 195 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 SLC35A4Q96G79 324 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 REEP6Q96HR9 211 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 PBDC1Q9BVG4 233 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 UCK1Q9HA47 277 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 ADAP2Q9NPF8 381 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 KCNJ16Q9NPI9 418 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 SLC2A8Q9NY64 477 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 PLA2G3Q9NZ20 509 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 ZNF281Q9Y2X9 895 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 TIMM10BQ9Y5J6 103 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 ESPL1Q14674 2120 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 A0A1W2PR80 420 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 F13BP05160 661 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 CRHP06850 196 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 NGFRP08138 427 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 CPMP14384 443 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 GABRA4P48169 554 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 TANGO2Q6ICL3 276 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 LPCAT3Q6P1A2 487 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 ARL6IP6Q8N6S5 226 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 NUP43Q8NFH3 380 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 ADAMTS15Q8TE58 950 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 FAM3DQ96BQ1 224 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 C2orf88Q9BSF0 95 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 KLK13Q9UKR3 277 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 SEC16AO15027 2179 aa6.55□□□□□ -1.36
LIMCH1-207ENST00000508466 PARP14Q460N5 1801 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 UNC13CQ8NB66 2214 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 LTBP1Q14766 1721 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 SMIM35A0A1B0GVV1 85 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 FAM221AA4D161 298 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 TRAPPC13A5PLN9 417 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 FAM221BA6H8Z2 402 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 ZNF860A6NHJ4 632 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 SEC14L6B5MCN3 397 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 C4orf51C9J302 202 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 ZNF587BE7ETH6 402 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 AQP7O14520 342 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 ABLIM3O94929 683 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 NXPH3O95157 252 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 IL18BPO95998 194 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 IFNGP01579 166 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 ITGB2P05107 769 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 CD5P06127 495 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 CSF1P09603 554 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 SLC2A1P11166 492 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 EPCAMP16422 314 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 GNB3P16520 340 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 SPINT3P49223 89 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 PSEN2P49810 448 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 PMPCAQ10713 525 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 OR1Q1Q15612 314 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 UBE2V2Q15819 145 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 ARSJQ5FYB0 599 aaPredicted RBP6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 C9orf131Q5VYM1 1079 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 HEPN1Q6WQI6 88 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 ZNF793Q6ZN11 406 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 RNF144BQ7Z419 303 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 MRGPREQ86SM8 312 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 TMEM150AQ86TG1 271 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 MARCH3Q86UD3 253 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 CMTM8Q8IZV2 173 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 ARL14EPQ8N8R7 260 aaPredicted RBP6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 GATSQ8NAP1 163 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 CPEB3Q8NE35 698 aaKnown RBP6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 OR5AK2Q8NH90 309 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 RNASE8Q8TDE3 154 aaKnown RBP6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 THAP3Q8WTV1 239 aaPredicted RBP6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 MRGPRFQ96AM1 343 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 MRGPRX3Q96LB0 322 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms