RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 METTL27Q8N6F8 245 aaPredicted RBP3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 VN1R2Q8NFZ6 395 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 OR2L5Q8NG80 312 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 SPPL2AQ8TCT8 520 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 MRAPQ8TCY5 172 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 RNASEH2CQ8TDP1 164 aaKnown RBP3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 CXorf40AQ8TE69 158 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 PPP1R14BQ96C90 147 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 PAGE5Q96GU1 130 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 PPP1R36Q96LQ0 422 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 MCCC1Q96RQ3 725 aaPredicted RBP3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 ATF6BQ99941 703 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 RARRES2Q99969 163 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 KLHDC3Q9BQ90 382 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 HCAR1Q9BXC0 346 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 FOLH1BQ9HBA9 442 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 EXOSC3Q9NQT5 275 aaKnown RBP3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 CTPS2Q9NRF8 586 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 MCUBQ9NWR8 336 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 GIN1Q9NXP7 522 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 LRRC42Q9Y546 428 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 PPLO60437 1756 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 ITSN1Q15811 1721 aa3.24□□□□□ -1.89
ATP2C1-213ENST00000508297 SCN4AP35499 1836 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 SPTBN5Q9NRC6 3674 aaKnown RBP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 WDR81Q562E7 1941 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 TRAV8-7A0A075B6U6 113 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 TRGV8A0A0C4DH27 118 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 E9PLD3 99 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 K7EMT4 169 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 SULT1C2O00338 296 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 TRAPPC6AO75865 159 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 VAMP5O95183 116 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 SERPINA6P08185 405 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 GABRG2P18507 467 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 SLC2A5P22732 501 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 RANBP1P43487 201 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 RPL14P50914 215 aaKnown RBP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 GPM6AP51674 278 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 ACTBP60709 375 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 DSTNP60981 165 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 ERVK-16P61578 105 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 ACTG1P63261 375 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 SLC25A11Q02978 314 aaKnown RBP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 SRSF4Q08170 494 aaKnown RBP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 ECH1Q13011 328 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 DYNC1I2Q13409 638 aaKnown RBP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 OR4D1Q15615 310 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 ZNHIT3Q15649 155 aaPredicted RBP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 PSMD5Q16401 504 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 SRSF7Q16629 238 aaKnown RBP eCLIP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 RGS21Q2M5E4 152 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 CLVS2Q5SYC1 327 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 MEDAGQ5VYS4 303 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 RFWD3Q6PCD5 774 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 REG3GQ6UW15 175 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 C12orf54Q6X4T0 127 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 C16orf82Q7Z2V1 217 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 VKORC1L1Q8N0U8 176 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 LRRC52Q8N7C0 313 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 ZNF557Q8N988 423 aaPredicted RBP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 TTLQ8NG68 377 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 OR10G7Q8NGN6 311 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 OR5M1Q8NGP8 315 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 OR5AR1Q8NGP9 310 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 OR51A7Q8NH64 312 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 OR5P2Q8WZ92 322 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 PHF3Q92576 2039 aaKnown RBP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 NEUROG1Q92886 237 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 PSMG2Q969U7 264 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 EEF1AKMT3Q96AZ1 226 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 ATXN7L3BQ96GX2 97 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 SEC22AQ96IW7 307 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 ITCHQ96J02 903 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 NOL4LQ96MY1 436 aaPredicted RBP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 RBBP8Q99708 897 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 COPS4Q9BT78 406 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 RSG1Q9BU20 258 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 MRM3Q9HC36 420 aaKnown RBP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 B3GAT2Q9NPZ5 323 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 IFT46Q9NQC8 304 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 Q9UF83 564 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 TBL2Q9Y4P3 447 aaKnown RBP3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 TAF1LQ8IZX4 1826 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 RGPD5Q99666 1765 aa3.23□□□□□ -1.89
ATP2C1-213ENST00000508297 UBR3Q6ZT12 1888 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 DENND4AQ7Z401 1863 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 PIK3C2GO75747 1445 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 ZNF816-ZNF321PA0A0X1KG74 233 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 SMIM28A0A1B0GU29 152 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 IQCMA0A1B0GVH7 501 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 MEIOCA2RUB1 952 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 GOLGA6L10A6NI86 522 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 GOLGA8JA6NMD2 632 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 HACD1B0YJ81 288 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 GOLGA8KD6RF30 607 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 LOC110117498-PIK3R3F6TDL0 507 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 SMKR1H3BMG3 65 aa3.22□□□□□ -1.89
ATP2C1-213ENST00000508297 GOLGA8MH3BSY2 632 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms