RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 TMEM165Q9HC07 324 aa5.74□□□□□ -1.49
NPIPB3-203ENST00000504841 GCM1Q9NP62 436 aa5.74□□□□□ -1.49
NPIPB3-203ENST00000504841 EMC7Q9NPA0 242 aa5.74□□□□□ -1.49
NPIPB3-203ENST00000504841 MEPEQ9NQ76 525 aaPredicted RBP5.74□□□□□ -1.49
NPIPB3-203ENST00000504841 PTTG3PQ9NZH4 202 aa5.74□□□□□ -1.49
NPIPB3-203ENST00000504841 VAPAQ9P0L0 249 aa5.74□□□□□ -1.49
NPIPB3-203ENST00000504841 STX18Q9P2W9 335 aaKnown RBP5.74□□□□□ -1.49
NPIPB3-203ENST00000504841 CLN8Q9UBY8 286 aa5.74□□□□□ -1.49
NPIPB3-203ENST00000504841 IL19Q9UHD0 177 aa5.74□□□□□ -1.49
NPIPB3-203ENST00000504841 NDRG4Q9ULP0 352 aaKnown RBP5.74□□□□□ -1.49
NPIPB3-203ENST00000504841 TIMM10BQ9Y5J6 103 aa5.74□□□□□ -1.49
NPIPB3-203ENST00000504841 PRKDCP78527 4128 aaKnown RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 LOC100996750A0A140TA64 210 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 GMNCA6NCL1 334 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 LRRC30A6NM36 301 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 C12orf71A8MTZ7 269 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 EVPLLA8MZ36 301 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 CENPBD1B2RD01 187 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 F5H5P2 479 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 H7C1C5 153 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 M0QX08 132 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 TNFRSF13BO14836 293 aaPredicted RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 ENSAO43768 121 aaKnown RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 CLPXO76031 633 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 TOX4O94842 621 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 VIMP08670 466 aaKnown RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 CST2P09228 141 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 NR2C1P13056 603 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 IRF2P14316 349 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 CD247P20963 164 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 KITLGP21583 273 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 MSR1P21757 451 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 PPIBP23284 216 aaKnown RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 GUCA1AP43080 201 aaPredicted RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 ZNF133P52736 654 aaPredicted RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 PCBD1P61457 104 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 LCN6P62502 163 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 VSNL1P62760 191 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 HOXA4Q00056 320 aaPredicted RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 GUCY1A3Q02108 690 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 EGR3Q06889 387 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 ENDOGQ14249 297 aaKnown RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 CYP51A1Q16850 503 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 ZNF404Q494X3 552 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 PAGE3Q5JUK9 113 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 LRIF1Q5T3J3 769 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 WDR25Q64LD2 544 aaPredicted RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 DHRS7BQ6IAN0 325 aaPredicted RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 SLC25A47Q6Q0C1 308 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 SLC30A8Q8IWU4 369 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 MICU2Q8IYU8 434 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 BOLLQ8N9W6 283 aaKnown RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 BHLHE23Q8NDY6 225 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 SLC26A7Q8TE54 656 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 TMEM255BQ8WV15 326 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 GATAD2BQ8WXI9 593 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 SLC7A6Q92536 515 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 LHX4Q969G2 390 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 DACT3Q96B18 629 aaPredicted RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 NMD3Q96D46 503 aaKnown RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 SGTBQ96EQ0 304 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 MPP4Q96JB8 637 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 MAELQ96JY0 434 aaKnown RBP5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 TBX15Q96SF7 602 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 TMEM38AQ9H6F2 299 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 EVA1AQ9H8M9 152 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 C20orf141Q9NUB4 165 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 ACOXLQ9NUZ1 547 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 TBCCD1Q9NVR7 557 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 THAP1Q9NVV9 213 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 CCDC167Q9P0B6 97 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 STARD10Q9Y365 291 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 POMT1Q9Y6A1 747 aa5.73□□□□□ -1.49
NPIPB3-203ENST00000504841 A0A0U1RQK1 487 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 CENPVL3A0A0U1RRI6 287 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 C5orf63A6NC05 138 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 BTBD17A6NE02 478 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 IFNL4K9M1U5 179 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 P2RY10O00398 339 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 PHYHO14832 338 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 SGCEO43556 437 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 ICMTO60725 284 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 SHOX2O60902 331 aaPredicted RBP5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 MT-ND1P03886 318 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 TNFRSF1BP20333 461 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 SRP9P49458 86 aaKnown RBP5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 MTPNP58546 118 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 TAS2R41P59536 307 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 SCRN3Q0VDG4 424 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 POU4F2Q12837 409 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 ALG10Q5BKT4 473 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 METTL11BQ5VVY1 283 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 OR2T2Q6IF00 324 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 DCDC5Q6ZRR9 648 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 Q6ZSV7 163 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 PTOV1Q86YD1 416 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 NKAIN4Q8IVV8 208 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 C1orf87Q8N0U7 546 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 C11orf44Q8N8P7 122 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms