RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MRPS26Q9BYN8 205 aaKnown RBP4.4□□□□□ -1.7
NIPBL-204ENST00000504430 DDX19AQ9NUU7 478 aaKnown RBP4.4□□□□□ -1.7
NIPBL-204ENST00000504430 TMEM181Q9P2C4 612 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 MMP17Q9ULZ9 603 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 CCDC144AA2RUR9 1427 aa4.4□□□□□ -1.7
NIPBL-204ENST00000504430 OR5H15A6NDH6 313 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF623O75123 536 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 GLSO94925 669 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-204ENST00000504430 NDUFB8O95169 186 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 BMP15O95972 392 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 NELFEP18615 380 aaKnown RBP4.4□□□□□ -1.71
NIPBL-204ENST00000504430 PVALBP20472 110 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-204ENST00000504430 MAP2K4P45985 399 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 ACOT2P49753 483 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 MFAP5Q13361 173 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF235Q14590 738 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 TOMM34Q15785 309 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-204ENST00000504430 GFRALQ6UXV0 394 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 C17orf64Q86WR6 236 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 RNF113BQ8IZP6 322 aaKnown RBP4.4□□□□□ -1.71
NIPBL-204ENST00000504430 EID2Q8N6I1 236 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 TMEM35BQ8NCS4 154 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 MAGEB18Q96M61 343 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 OLFM3Q96PB7 478 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 NIPSNAP3BQ9BS92 247 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 ALX4Q9H161 411 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-204ENST00000504430 ELOVL5Q9NYP7 299 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 SS18L2Q9UHA2 77 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 RALYQ9UKM9 306 aaKnown RBP4.4□□□□□ -1.71
NIPBL-204ENST00000504430 UFC1Q9Y3C8 167 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 FRMPD3Q5JV73 1810 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 NGFP01138 241 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 KLK3P07288 261 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-204ENST00000504430 TBPP20226 339 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 TMEM187Q14656 261 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 OR52E8Q6IFG1 317 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF549Q6P9A3 640 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF564Q8TBZ8 553 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-204ENST00000504430 FNDC4Q9H6D8 234 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-204ENST00000504430 MYOZ1Q9NP98 299 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-204ENST00000504430 ESM1Q9NQ30 184 aa4.4□□□□□ -1.71
NIPBL-204ENST00000504430 THAP10Q9P2Z0 257 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-204ENST00000504430 AQRO60306 1485 aaKnown RBP eCLIP4.39□□□□□ -1.718e-7■■■■□ 24
NIPBL-204ENST00000504430 NUP160Q12769 1436 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 A0A087WZ39 114 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 GJE1A6NN92 205 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 PP2D1A8MPX8 630 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 MIF4GDA9UHW6 222 aaKnown RBP4.39□□□□□ -1.71
NIPBL-204ENST00000504430 HACD1B0YJ81 288 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 ANKRD63C9JTQ0 380 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 H7C0C1 242 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 JTBO76095 146 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 TBX6O95947 436 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-204ENST00000504430 REG1AP05451 166 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 FAM106CPP0CH98 169 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 ACRV1P26436 265 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 CCR6P51684 374 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 AP2S1P53680 142 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-204ENST00000504430 ST3GAL1Q11201 340 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 TEX30Q5JUR7 227 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 CST9Q5W186 159 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 PIGZQ86VD9 579 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 RIMKLAQ8IXN7 391 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 EIF4E3Q8N5X7 224 aaKnown RBP4.39□□□□□ -1.71
NIPBL-204ENST00000504430 ARIH2OSQ8N7S6 290 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 OR10G3Q8NGC4 313 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 ADGRG7Q96K78 797 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 OR51I1Q9H343 314 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 PPDPFQ9H3Y8 114 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 DHX35Q9H5Z1 703 aaKnown RBP4.39□□□□□ -1.71
NIPBL-204ENST00000504430 GLTPQ9NZD2 209 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 CCDC59Q9P031 241 aaKnown RBP4.39□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF256Q9Y2P7 627 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-204ENST00000504430 PRELID3BQ9Y3B1 194 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 ARL5AQ9Y689 179 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 TRDCB7Z8K6 153 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 DVL1O14640 695 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 SURF4O15260 269 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 FAM157CP0CG43 387 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF250P15622 560 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 FOXG1P55316 489 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-204ENST00000504430 RBMS2Q15434 407 aaKnown RBP4.39□□□□□ -1.71
NIPBL-204ENST00000504430 ATP6AP1Q15904 470 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 ZIC1Q15915 447 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 TMEM176BQ3YBM2 270 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-204ENST00000504430 RESP18Q5W5W9 173 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 OR6K6Q8NGW6 343 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 ARPC1AQ92747 370 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 DNAJC19Q96DA6 116 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 LPAR4Q99677 370 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 TLNRD1Q9H1K6 362 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 KLK15Q9H2R5 256 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 FBXL4Q9UKA2 621 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 SYNJ2O15056 1496 aa4.39□□□□□ -1.71
NIPBL-204ENST00000504430 A0A0A6YYD4 124 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 A0A0G2JNG1 304 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 OR5B21A6NL26 309 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF814B7Z6K7 855 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 BUB3O43684 328 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 FOLR1P15328 257 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms