RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 OVCA2Q8WZ82 227 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 HIST1H2BHQ93079 126 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 SEH1LQ96EE3 360 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 HIST1H2BNQ99877 126 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 HIST1H2BMQ99879 126 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 DPH1Q9BZG8 443 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 RHBGQ9H310 441 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 SRMSQ9H3Y6 488 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 PRSS16Q9NQE7 514 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 FBXO4Q9UKT5 387 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 SH2B3Q9UQQ2 575 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 SIGLEC7Q9Y286 467 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 MRPS33Q9Y291 106 aaKnown RBP8.19□□□□□ -1.1
HPS4-217ENST00000496385 GPR55Q9Y2T6 319 aaPredicted RBP8.19□□□□□ -1.1
HPS4-217ENST00000496385 F5P12259 2224 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 A0A1W2PPE2 198 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 C5orf51A6NDU8 294 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 ZNF736B4DX44 427 aaPredicted RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 PLPP1O14494 284 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 STC2O76061 302 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 JTBO76095 146 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 SFTPBP07988 381 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 SERPINA4P29622 427 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 BSGP35613 385 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 FNDC3BQ53EP0 1204 aaKnown RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 EIPR1Q53HC9 387 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 DCAF10Q5QP82 559 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 PHF19Q5T6S3 580 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 KHDRBS2Q5VWX1 349 aaKnown RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 Q6ZRG5 221 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 TRAPPC5Q8IUR0 188 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 YAF2Q8IY57 180 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 LRRC18Q8N456 261 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 OR2A12Q8NGT7 310 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 ZNF480Q8WV37 535 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 AMDHD1Q96NU7 426 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 DDA1Q9BW61 102 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 SCRT1Q9BWW7 348 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 GPR174Q9BXC1 333 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 KLF16Q9BXK1 252 aaPredicted RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 GLIPR2Q9H4G4 154 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 SLC7A7Q9UM01 511 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 FCF1Q9Y324 198 aaKnown RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 C19orf67A6NJJ6 358 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 EEF1E1-BLOC1S5C9J1V9 151 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 DOK2O60496 412 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 ZFPL1O95159 310 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 GCGP01275 180 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 CSTBP04080 98 aaKnown RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 F13BP05160 661 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 SOD3P08294 240 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 ZNF25P17030 456 aaPredicted RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 NTSP30990 170 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 CORO1AP31146 461 aaKnown RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 SLC6A6P31641 620 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 TAS2R38P59533 333 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 GUCA2AQ02747 115 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 PPP1R1AQ13522 171 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 ZNF77Q15935 545 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 HAGHQ16775 308 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 CYB5R2Q6BCY4 276 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 TAF8Q7Z7C8 310 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 DCAF4L2Q8NA75 395 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 LFNGQ8NES3 379 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 OR9A2Q8NGT5 310 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 GPR148Q8TDV2 347 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 DTD1Q8TEA8 209 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 TMEM239Q8WW34 195 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 DVL3Q92997 716 aaPredicted RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 ZNF775Q96BV0 537 aaPredicted RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 RRNAD1Q96FB5 475 aaKnown RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 PACRGQ96M98 296 aaPredicted RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 SMAD5Q99717 465 aaKnown RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 PRSS27Q9BQR3 290 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 SUCNR1Q9BXA5 334 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 RAB33BQ9H082 229 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 EPHX3Q9H6B9 360 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 RAB18Q9NP72 206 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 FAM212BQ9NTI7 297 aaPredicted RBP8.18□□□□□ -1.1
HPS4-217ENST00000496385 SLC23A2Q9UGH3 650 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 TCFL5Q9UL49 500 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 VPS13AQ96RL7 3174 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 ATG2BQ96BY7 2078 aa8.18□□□□□ -1.1
HPS4-217ENST00000496385 TRBV5-7A0A0A0MS05 114 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 LOC100289279A0A1B0GTE1 492 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 NPIPB15A6NHN6 443 aaPredicted RBP8.17□□□□□ -1.1
HPS4-217ENST00000496385 SLC9A5Q14940 896 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 ZNF674Q2M3X9 581 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 TMEM268Q5VZI3 342 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 MTSS1LQ765P7 747 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 LRRTM4Q86VH4 590 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 GKN2Q86XP6 184 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 RGP1Q92546 391 aaPredicted RBP8.17□□□□□ -1.1
HPS4-217ENST00000496385 ELSPBP1Q96BH3 223 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 NTNG2Q96CW9 530 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 MVB12AQ96EY5 273 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 COL25A1Q9BXS0 654 aaPredicted RBP8.17□□□□□ -1.1
HPS4-217ENST00000496385 ASCL3Q9NQ33 180 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 FBXL21Q9UKT6 434 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 VSIG4Q9Y279 399 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms