RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 NPIPB4C9JG80 1138 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 TMEM178BH3BS89 294 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 MRASO14807 208 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 HOXA3O43365 443 aaPredicted RBP8.09□□□□□ -1.11
UBR4-216ENST00000494503 ZNF682O95780 498 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 KNG1P01042 644 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 THRBP10828 461 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 IRF2P14316 349 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 ERFP50548 548 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 TTMPQ5BVD1 217 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 BEND6Q5SZJ8 279 aaPredicted RBP8.09□□□□□ -1.11
UBR4-216ENST00000494503 OR2T2Q6IF00 324 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 SLC27A4Q6P1M0 643 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 LRRN1Q6UXK5 716 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 BRD3OSQ6XYD6 125 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 Q6ZR03 302 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 CCDC80Q76M96 950 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 VASH1Q7L8A9 365 aaPredicted RBP8.09□□□□□ -1.11
UBR4-216ENST00000494503 NLRC3Q7RTR2 1065 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 MOGAT3Q86VF5 341 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 OR8B3Q8NGG8 313 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 TMIGD2Q96BF3 282 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 PRRC1Q96M27 445 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 C1orf147Q96MC9 270 aaPredicted RBP8.09□□□□□ -1.11
UBR4-216ENST00000494503 COG8Q96MW5 612 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 ZNF582Q96NG8 517 aaPredicted RBP8.09□□□□□ -1.11
UBR4-216ENST00000494503 ZNF570Q96NI8 536 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 OR8B2Q96RD0 313 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 CCT8L2Q96SF2 557 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 MMADHCQ9H3L0 296 aaPredicted RBP8.09□□□□□ -1.11
UBR4-216ENST00000494503 GCM1Q9NP62 436 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 TBCCD1Q9NVR7 557 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 KIF17Q9P2E2 1029 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 ASH2LQ9UBL3 628 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 KLHL21Q9UJP4 597 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 STARD10Q9Y365 291 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 ADAM18Q9Y3Q7 739 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 POM121CA8CG34 1229 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 A8MXK9 166 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 J3KTA2 159 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 FBP2O00757 339 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 GSTA4O15217 222 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 SLC16A7O60669 478 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 IGF2P01344 180 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 IFNW1P05000 195 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 SCG5P05408 212 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 CD80P33681 288 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 PITPNBP48739 271 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 SRP9P49458 86 aaKnown RBP8.08□□□□□ -1.12
UBR4-216ENST00000494503 AQP6Q13520 282 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 TRAM2Q15035 370 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 GPR157Q5UAW9 335 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 C16orf87Q6PH81 154 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 BRICD5Q6PL45 260 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 FKBP9P1Q75LS8 142 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 SYT9Q86SS6 491 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 KLBQ86Z14 1044 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 BOLLQ8N9W6 283 aaKnown RBP8.08□□□□□ -1.12
UBR4-216ENST00000494503 OR2T12Q8NG77 320 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 OR8J3Q8NGG0 315 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 OR5L1Q8NGL2 311 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 OR10S1Q8NGN2 331 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 TSPEARQ8WU66 669 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 C10orf82Q8WW14 230 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 LIPHQ8WWY8 451 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 PTP4A1Q93096 173 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 NEIL1Q96FI4 390 aaPredicted RBP8.08□□□□□ -1.12
UBR4-216ENST00000494503 MAGEB18Q96M61 343 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 Q96M85 177 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 TECTBQ96PL2 329 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 SIGLEC11Q96RL6 698 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 PCGF1Q9BSM1 259 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 WDR76Q9H967 626 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 MARCH7Q9H992 704 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 CLN8Q9UBY8 286 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 MIOXQ9UGB7 285 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 IL20RAQ9UHF4 553 aa8.08□□□□□ -1.12
UBR4-216ENST00000494503 NOTCH1P46531 2555 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 IGHV2-70DA0A0C4DH43 119 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 TEX13CA0A0J9YWL9 993 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 LOC100653049A0A140TA62 436 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 FAM181BA6NEQ2 426 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 F5H0A9 414 aaPredicted RBP8.07□□□□□ -1.12
UBR4-216ENST00000494503 F5H5P2 479 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 H0YL77 283 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 SOCS2O14508 198 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 KRT34O76011 436 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 DBHP09172 617 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 WNT2P09544 360 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 COX5BP10606 129 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 CTLA4P16410 223 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 SELEP16581 610 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 KITLGP21583 273 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 KDELR2P33947 212 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 GZMMP51124 257 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 PRSS12P56730 875 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 SRSF4Q08170 494 aaKnown RBP8.07□□□□□ -1.12
UBR4-216ENST00000494503 KRR1Q13601 381 aaKnown RBP8.07□□□□□ -1.12
UBR4-216ENST00000494503 MAPRE2Q15555 327 aa8.07□□□□□ -1.12
UBR4-216ENST00000494503 DEFB112Q30KQ8 113 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms