RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 DHDHQ9UQ10 334 aa9.44□□□□□ -0.9
CLCN6-208ENST00000494028 SPAARA0A1B0GVQ0 90 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 ZNF726A6NNF4 738 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 ZNF716A6NP11 495 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 CTDSPLO15194 276 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 GSTZ1O43708 216 aaPredicted RBP9.43□□□□□ -0.9
CLCN6-208ENST00000494028 DOK2O60496 412 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 LMX1BO60663 402 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 TTRP02766 147 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 MAS1P04201 325 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 ISG15P05161 165 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 ACSM4P0C7M7 580 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 POU3F2P20265 443 aaPredicted RBP9.43□□□□□ -0.9
CLCN6-208ENST00000494028 CNR1P21554 472 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 ITGA3P26006 1051 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 BTCP35070 178 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 CD96P40200 585 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 MNDAP41218 407 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 MMP15P51511 669 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 MMP16P51512 607 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 GFRA1P56159 465 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 TPTEP56180 551 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 SCAND1P57086 179 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 RAC3P60763 192 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 AIMP2Q13155 320 aaKnown RBP9.43□□□□□ -0.9
CLCN6-208ENST00000494028 ENDOGQ14249 297 aaKnown RBP9.43□□□□□ -0.9
CLCN6-208ENST00000494028 HACD4Q5VWC8 232 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 ZNF57Q68EA5 555 aaPredicted RBP9.43□□□□□ -0.9
CLCN6-208ENST00000494028 FAM166AQ6J272 317 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 LRFN4Q6PJG9 635 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 ZNF704Q6ZNC4 412 aaPredicted RBP9.43□□□□□ -0.9
CLCN6-208ENST00000494028 FCRLAQ7L513 359 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 AKAP14Q86UN6 197 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 IZUMO1Q8IYV9 350 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 ZIC4Q8N9L1 334 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 SMIM4Q8WVI0 70 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 ASB5Q8WWX0 329 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 NKD1Q969G9 470 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 PNPLA2Q96AD5 504 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 UPRTQ96BW1 309 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 IP6K3Q96PC2 410 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 FAM173AQ9BQD7 235 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 HDHD2Q9H0R4 259 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 ABCG5Q9H222 651 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 PLEKHA1Q9HB21 404 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 CENPMQ9NSP4 180 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 DDX28Q9NUL7 540 aaKnown RBP9.43□□□□□ -0.9
CLCN6-208ENST00000494028 NPAP1Q9NZP6 1156 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 ASH2LQ9UBL3 628 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 STEAP1Q9UHE8 339 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 NUFIP1Q9UHK0 495 aaKnown RBP9.43□□□□□ -0.9
CLCN6-208ENST00000494028 HHLA2Q9UM44 414 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 FOXJ3Q9UPW0 622 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 CAMK2AQ9UQM7 478 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 RCE1Q9Y256 329 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 MRPS18CQ9Y3D5 142 aaKnown RBP9.43□□□□□ -0.9
CLCN6-208ENST00000494028 MED13Q9UHV7 2174 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 PCNX2A6NKB5 2137 aa9.43□□□□□ -0.9
CLCN6-208ENST00000494028 CDRT15L2A8MXV6 281 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 P2RY10O00398 339 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 SLC17A2O00624 439 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 TFECO14948 347 aaPredicted RBP9.42□□□□□ -0.9
CLCN6-208ENST00000494028 TLX3O43711 291 aaPredicted RBP9.42□□□□□ -0.9
CLCN6-208ENST00000494028 CXCL13O43927 109 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 CD2P06729 351 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 CD3GP09693 182 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 MSR1P21757 451 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 ENPP1P22413 925 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 ANOS1P23352 680 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 CD82P27701 267 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 INPP1P49441 399 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 SELENOPP49908 381 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 PLA2G7Q13093 441 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 GPR176Q14439 515 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 OR1C1Q15619 314 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 CARTPTQ16568 116 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 ATP1A1-AS1Q5TC04 95 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 SPINK14Q6IE38 97 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 MZT2BQ6NZ67 158 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 KLHL24Q6TFL4 600 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 DTX1Q86Y01 620 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 ELMOD2Q8IZ81 293 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 MDS2Q8NDY4 140 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 OR51A2Q8NGJ7 313 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 OR13C3Q8NGS6 347 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 OR6N1Q8NGY5 312 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 OR10D3Q8NH80 312 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 SYNPRQ8TBG9 265 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 HPS1Q92902 700 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 HAVCR1Q96D42 359 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 UTP23Q9BRU9 249 aaKnown RBP9.42□□□□□ -0.9
CLCN6-208ENST00000494028 SF3B5Q9BWJ5 86 aaKnown RBP9.42□□□□□ -0.9
CLCN6-208ENST00000494028 IRF2BPLQ9H1B7 796 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 KCNK15Q9H427 330 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 SEC61A2Q9H9S3 476 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 RABL2AQ9UBK7 228 aaPredicted RBP9.42□□□□□ -0.9
CLCN6-208ENST00000494028 RABL2BQ9UNT1 228 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 RHBDD3Q9Y3P4 386 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 FLVCR1Q9Y5Y0 555 aa9.42□□□□□ -0.9
CLCN6-208ENST00000494028 NCOA6Q14686 2063 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms