RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 HPNP05981 417 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SMIM18P0DKX4 95 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF250P15622 560 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 HIST1H1BP16401 226 aaKnown RBP3.71□□□□□ -1.82
BRCA1-220ENST00000492859 NTSP30990 170 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SSTR4P31391 388 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 RPL13AP40429 203 aaKnown RBP3.71□□□□□ -1.82
BRCA1-220ENST00000492859 NKX2-1P43699 371 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-220ENST00000492859 PGGT1BP53609 377 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 AQP5P55064 265 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SNRPEP62304 92 aaKnown RBP3.71□□□□□ -1.82
BRCA1-220ENST00000492859 GNGT1P63211 74 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SLC35B1P78383 322 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 PSG6Q00889 435 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SLC18A2Q05940 514 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 MFGE8Q08431 387 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-220ENST00000492859 C3AR1Q16581 482 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 ISXQ2M1V0 245 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 TTLL9Q3SXZ7 439 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 TP53I3Q53FA7 332 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 PYCR3Q53H96 274 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 OCIAD2Q56VL3 154 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 VWA2Q5GFL6 755 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 DMRTC1Q5HYR2 192 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 ELFN2Q5R3F8 820 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 CPTPQ5TA50 214 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 XKRXQ6PP77 449 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 CD300LDQ6UXZ3 194 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 PQLC2Q6ZP29 291 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 FAM19A1Q7Z5A9 133 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 MOB3BQ86TA1 216 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 DOLPP1Q86YN1 238 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SNX29P2Q8IUI4 249 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF547Q8IVP9 402 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 CMTM1Q8IZ96 169 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 KBTBD8Q8NFY9 601 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 OR13G1Q8NGZ3 307 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SKA2Q8WVK7 121 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-220ENST00000492859 MRPS31Q92665 395 aaKnown RBP3.71□□□□□ -1.82
BRCA1-220ENST00000492859 KIRREL1Q96J84 757 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 FCRL1Q96LA6 429 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 COL21A1Q96P44 957 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 RCHY1Q96PM5 261 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 DUX3Q96PT4 197 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 FCRL5Q96RD9 977 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SIGMAR1Q99720 223 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 RAB11FIP5Q9BXF6 653 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 DCSTAMPQ9H295 470 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 TMPRSS5Q9H3S3 457 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 MAP1LC3AQ9H492 121 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 RPF2Q9H7B2 306 aaKnown RBP3.71□□□□□ -1.82
BRCA1-220ENST00000492859 ADGRL4Q9HBW9 690 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 MSL2Q9HCI7 577 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 ACP6Q9NPH0 428 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 LHX9Q9NQ69 397 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SIGLEC8Q9NYZ4 499 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 IL17CQ9P0M4 197 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 LGALS13Q9UHV8 139 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 RALYQ9UKM9 306 aaKnown RBP3.71□□□□□ -1.82
BRCA1-220ENST00000492859 OAZ3Q9UMX2 235 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 RCL1Q9Y2P8 373 aaKnown RBP3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SIGLEC9Q9Y336 463 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 SIT1Q9Y3P8 196 aa3.71□□□□□ -1.82
BRCA1-220ENST00000492859 EIF4G3O43432 1585 aaKnown RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 NLRP1Q9C000 1473 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 ARHGAP23Q9P227 1491 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 NOS1P29475 1434 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 UACAQ9BZF9 1416 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 TRAV24A0A0B4J272 114 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 TCRBV7S3A2A0A539 114 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 ISPDA4D126 451 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 GMNCA6NCL1 334 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CASTOR2A6NHX0 329 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 ZAR1LA6NP61 321 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 C17orf105B2RV13 164 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 F6UZH7 168 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 I3L4J1 428 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 M0R143 59 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 DNASE2O00115 360 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 FAAHO00519 579 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 PLPP1O14494 284 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CDC40O60508 579 aaKnown RBP eCLIP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 ZG16O60844 167 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 SPAG7O75391 227 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 UGT2B17O75795 530 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CNMDO75829 334 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 STK17BO94768 372 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 TTLL1O95922 423 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CBX7O95931 251 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 BMP15O95972 392 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CA1P00915 261 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CRYAAP02489 173 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 PRSS56P0CW18 603 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CT45A8P0DMV1 189 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CT45A9P0DMV2 189 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CYBAP13498 195 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF30P17039 623 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 HTR1EP28566 365 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 TNFSF9P41273 254 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CDKN2BP42772 138 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms