RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 FAM27BQ5VT28 67 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 MBNL2Q5VZF2 373 aaKnown RBP7.78□□□□□ -1.16
HDAC3-212ENST00000492407 Q6ZNX1 250 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 VASH1Q7L8A9 365 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-212ENST00000492407 TRPM8Q7Z2W7 1104 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 C1QL2Q7Z5L3 287 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 KCTD20Q7Z5Y7 419 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 RETREG3Q86VR2 466 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 CARM1Q86X55 608 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 TREML1Q86YW5 311 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 NANPQ8TBE9 248 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 ELMOD3Q96FG2 381 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF570Q96NI8 536 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 PRSS27Q9BQR3 290 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 SUCNR1Q9BXA5 334 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 EGLN1Q9GZT9 426 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 DIABLOQ9NR28 239 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 ZDHHC8Q9ULC8 765 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 LRRC42Q9Y546 428 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 PLSCR5A0PG75 271 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 MCIDASD6RGH6 385 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 ANKRD65E5RJM6 399 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 BLOC1S5-TXNDC5H3BN57 136 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 WNT9BO14905 357 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 PLPP2O43688 288 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 NOL3O60936 208 aaKnown RBP7.77□□□□□ -1.17
HDAC3-212ENST00000492407 TMEM127O75204 238 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 GMNNO75496 209 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 OR7A10O76100 309 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 MPZL1O95297 269 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 PLATP00750 562 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 IGHV2-5P01817 119 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 CD55P08174 381 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 FAM157BP0CG42 384 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 UMPSP11172 480 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 ADRA2CP18825 462 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 FUT1P19526 365 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 EPHA1P21709 976 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 STOMP27105 288 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 MAPK3P27361 379 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-212ENST00000492407 GCH1P30793 250 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 PCP4P48539 62 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 GZMMP51124 257 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 ZNF81P51508 661 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 MMP15P51511 669 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 PCBD1P61457 104 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 HSF2Q03933 536 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 RPL18Q07020 188 aaKnown RBP7.77□□□□□ -1.17
HDAC3-212ENST00000492407 VMACQ2NL98 169 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 COQ5Q5HYK3 327 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 THEM4Q5T1C6 240 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 FAM205BPQ63HN1 556 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 ARL9Q6T311 187 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 SYT9Q86SS6 491 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 PEG10Q86TG7 708 aaKnown RBP7.77□□□□□ -1.17
HDAC3-212ENST00000492407 RBM45Q8IUH3 476 aaKnown RBP7.77□□□□□ -1.17
HDAC3-212ENST00000492407 PAQR4Q8N4S7 273 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-212ENST00000492407 LRRC17Q8N6Y2 441 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 NOXO1Q8NFA2 376 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 OR1J1Q8NGS3 322 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 ASB10Q8WXI3 467 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 GCDHQ92947 438 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-212ENST00000492407 TAMM41Q96BW9 452 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 NMD3Q96D46 503 aaKnown RBP7.77□□□□□ -1.17
HDAC3-212ENST00000492407 MARS2Q96GW9 593 aaKnown RBP7.77□□□□□ -1.17
HDAC3-212ENST00000492407 POM121L2Q96KW2 1035 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 ALG12Q9BV10 488 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 PLA2G12AQ9BZM1 189 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 SP140LQ9H930 580 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 NANOGQ9H9S0 305 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 SAP30LQ9HAJ7 183 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 CCNB1IP1Q9NPC3 277 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 MEPEQ9NQ76 525 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-212ENST00000492407 KLHL21Q9UJP4 597 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.77□□□□□ -1.17
HDAC3-212ENST00000492407 FZR1Q9UM11 496 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 GAB2Q9UQC2 676 aa7.77□□□□□ -1.17
HDAC3-212ENST00000492407 FBP2O00757 339 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 RGS13O14921 159 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 TRMUO75648 421 aaKnown RBP7.76□□□□□ -1.17
HDAC3-212ENST00000492407 OPN1SWP03999 348 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 CST2P09228 141 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 FPR2P25090 351 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 GUCA1AP43080 201 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-212ENST00000492407 MTPNP58546 118 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 ACTG1P63261 375 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 NFYCQ13952 458 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 MELKQ14680 651 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 PABPC1L2AQ5JQF8 200 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 DCAF12L2Q5VW00 463 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 WDR73Q6P4I2 378 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 C1orf229Q6ZS94 237 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-212ENST00000492407 C3orf56Q8N813 242 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 OR8J3Q8NGG0 315 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 OR4D11Q8NGI4 311 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 OR10A6Q8NH74 314 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 VANGL1Q8TAA9 524 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-212ENST00000492407 TMEM239Q8WW34 195 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 NABP1Q96AH0 204 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 SGTBQ96EQ0 304 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms