RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 PIPOXQ9P0Z9 390 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 MTFP1Q9UDX5 166 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 FARSAQ9Y285 508 aaKnown RBP11.09□□□□□ -0.63
HMGN1-220ENST00000492280 SLC5A6Q9Y289 635 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 BOD1L1Q8NFC6 3051 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 IGLV3-12A0A075B6K2 115 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 LOC100289279A0A1B0GTE1 492 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 CENPBD1B2RD01 187 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 NOS1APO75052 506 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-220ENST00000492280 SRSF10O75494 262 aaKnown RBP11.09□□□□□ -0.63
HMGN1-220ENST00000492280 NDUFB6O95139 128 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 RAF1P04049 648 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 CD2P06729 351 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 PRSS12P56730 875 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 GNG2P59768 71 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 NR0B2Q15466 257 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 TMEM176BQ3YBM2 270 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-220ENST00000492280 ZNF385CQ66K41 422 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-220ENST00000492280 OLFML2AQ68BL7 652 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 TEX261Q6UWH6 196 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 RABEPKQ7Z6M1 372 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 KMT5CQ86Y97 462 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 OR52N4Q8NGI2 321 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 ASB17Q8WXJ9 295 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 SLC25A28Q96A46 364 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 CLDN23Q96B33 292 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 SLAMF6Q96DU3 332 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 GPR137Q96N19 417 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 TGIF2Q9GZN2 237 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 RANBP3Q9H6Z4 567 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-220ENST00000492280 AKAP7Q9P0M2 348 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-220ENST00000492280 FBXO4Q9UKT5 387 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 WIF1Q9Y5W5 379 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 U3KQ87 197 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 DNAJC13O75165 2243 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 WIPF3A6NGB9 483 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 RER1O15258 196 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 ACSM4P0C7M7 580 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF24P17028 368 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 PSMA6P60900 246 aaKnown RBP11.08□□□□□ -0.64
HMGN1-220ENST00000492280 EXOSC2Q13868 293 aaKnown RBP11.08□□□□□ -0.64
HMGN1-220ENST00000492280 GVQW1Q8N7I0 195 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 ST8SIA1Q92185 356 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 DDIT4LQ96D03 193 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 ELMOD3Q96FG2 381 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 CMTM3Q96MX0 182 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 DEFB126Q9BYW3 111 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 CKLFQ9UBR5 152 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 HHLA2Q9UM44 414 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 DSPP15924 2871 aaKnown RBP11.08□□□□□ -0.64
HMGN1-220ENST00000492280 A0A1B0GUH1 482 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF432O94892 652 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 IGHMP01871 453 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 ABOP16442 354 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 LCN1P31025 176 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 PRSS3P35030 304 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 H2BFSP57053 126 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 GRK1Q15835 563 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 SCGB2B2Q4G0G5 96 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 CHMP1BQ7LBR1 199 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 MUC20Q8N307 709 aaPredicted RBP11.08□□□□□ -0.64
HMGN1-220ENST00000492280 OR10H5Q8NGA6 315 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 MFSD8Q8NHS3 518 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 NUDCD2Q8WVJ2 157 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 MNTQ99583 582 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 TMEM138Q9NPI0 162 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 DIABLOQ9NR28 239 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 ASH2LQ9UBL3 628 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 TECTAO75443 2155 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 FREM1Q5H8C1 2179 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 GOSR2O14653 212 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 CREBL2O60519 120 aaPredicted RBP11.08□□□□□ -0.64
HMGN1-220ENST00000492280 F10P00742 488 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 TTRP02766 147 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF35P13682 527 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 POU3F2P20265 443 aaPredicted RBP11.08□□□□□ -0.64
HMGN1-220ENST00000492280 APOBEC1P41238 236 aaKnown RBP11.08□□□□□ -0.64
HMGN1-220ENST00000492280 DAP3P51398 398 aaKnown RBP11.08□□□□□ -0.64
HMGN1-220ENST00000492280 MAP2K6P52564 334 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 SFRP5Q5T4F7 317 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 METTL11BQ5VVY1 283 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 OR52W1Q6IF63 320 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 FAM166AQ6J272 317 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 CD163Q86VB7 1156 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 WDSUB1Q8N9V3 476 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 NUBPLQ8TB37 319 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 IFI44Q8TCB0 444 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 OR51E1Q8TCB6 317 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 NPRL2Q8WTW4 380 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 OIT3Q8WWZ8 545 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 GNRHR2Q96P88 292 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 CNTD2Q9H8S5 307 aa11.08□□□□□ -0.64
HMGN1-220ENST00000492280 NPDC1Q9NQX5 325 aaPredicted RBP11.08□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF407Q9C0G0 2248 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 A0A1B0GTQ1 180 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 A0A1W2PP11 408 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 A0A1W2PQ72 361 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 POM121CA8CG34 1229 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 SULT1B1O43704 296 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 CXCL2P19875 107 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms