RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 EFNB1P98172 346 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 GALK2Q01415 458 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 MSMPQ1L6U9 139 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 SLC35D3Q5M8T2 416 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 ELFN2Q5R3F8 820 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 LCN1P1Q5VSP4 162 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 AADACL4Q5VUY2 407 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 NXNL2Q5VZ03 156 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 C20orf204Q6ZNR8 217 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 SPATC1Q76KD6 591 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 DPY19L4Q7Z388 723 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 DCXRQ7Z4W1 244 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 TIGD4Q8IY51 512 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 ALDH16A1Q8IZ83 802 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 ZNF101Q8IZC7 436 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 RFLNBQ8N5W9 214 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 ZNF611Q8N823 705 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 GJC3Q8NFK1 279 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 OR1F12Q8NHA8 337 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 CYGBQ8WWM9 190 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 UBE2FQ969M7 185 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 POM121L2Q96KW2 1035 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 AMELYQ99218 206 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 CCL19Q99731 98 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 CDADC1Q9BWV3 514 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 TTTY10Q9BZA0 68 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 HDHD2Q9H0R4 259 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 MARCH7Q9H992 704 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 PNRC2Q9NPJ4 139 aaKnown RBP9.54□□□□□ -0.88
UBE4B-210ENST00000488228 CA10Q9NS85 328 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 FAM118AQ9NWS6 357 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 ST6GALNAC2Q9UJ37 374 aa9.54□□□□□ -0.88
UBE4B-210ENST00000488228 NDRG4Q9ULP0 352 aaKnown RBP9.54□□□□□ -0.88
UBE4B-210ENST00000488228 AKAP9Q99996 3911 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 PRRC2AP48634 2157 aaKnown RBP9.53□□□□□ -0.88
UBE4B-210ENST00000488228 LOC100130705A0A1B0GUX0 176 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 ZNF593O00488 134 aaPredicted RBP9.53□□□□□ -0.88
UBE4B-210ENST00000488228 RRP9O43818 475 aaKnown RBP9.53□□□□□ -0.88
UBE4B-210ENST00000488228 SMPD2O60906 423 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 APOL3O95236 402 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 ATP6V1G2O95670 118 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 CLIC3O95833 236 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 PTHP01270 115 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 RAF1P04049 648 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 DANCRP0C864 163 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 NR4A1P22736 598 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 THBS4P35443 961 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 EIF2B1Q14232 305 aaKnown RBP9.53□□□□□ -0.88
UBE4B-210ENST00000488228 ADIPOQQ15848 244 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 PCK2Q16822 640 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 SPATA46Q5T0L3 261 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 MEPCEQ7L2J0 689 aaKnown RBP9.53□□□□□ -0.88
UBE4B-210ENST00000488228 GID4Q8IVV7 300 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 NUP37Q8NFH4 326 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 IL17RDQ8NFM7 739 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 OR4F15Q8NGB8 312 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 OR8J1Q8NGP2 316 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 OR1J2Q8NGS2 313 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 ABHD4Q8TB40 342 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 ST7LQ8TDW4 575 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 TMEM171Q8WVE6 324 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 ZNF582Q96NG8 517 aaPredicted RBP9.53□□□□□ -0.88
UBE4B-210ENST00000488228 RDH12Q96NR8 316 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 CNN2Q99439 309 aaKnown RBP9.53□□□□□ -0.88
UBE4B-210ENST00000488228 ATF6BQ99941 703 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 DHRS9Q9BPW9 319 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 WACQ9BTA9 647 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 C8orf4Q9NR00 106 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 FZR1Q9UM11 496 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 LAMP3Q9UQV4 416 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 ITPR3Q14573 2671 aa9.53□□□□□ -0.88
UBE4B-210ENST00000488228 MAP1AP78559 2803 aaPredicted RBP9.53□□□□□ -0.88
UBE4B-210ENST00000488228 SLC22A31A6NKX4 558 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 SLC16A6O15403 523 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 ENTPD6O75354 484 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 ABHD16AO95870 558 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 OR4A8P0C604 315 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 COX5BP10606 129 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 CD53P19397 219 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 ANOS1P23352 680 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 TTKP33981 857 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 FABP6P51161 128 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 HCCSP53701 268 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 AQP4P55087 323 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 KEAP1Q14145 624 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 GGTLC2Q14390 218 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 TEX30Q5JUR7 227 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 OTOGQ6ZRI0 2925 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 SHFQ7M4L6 423 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 ENTHD1Q8IYW4 607 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 ZNF555Q8NEP9 628 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 SLAMF6Q96DU3 332 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 TEAD3Q99594 435 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 COQ7Q99807 217 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 COPS4Q9BT78 406 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 TRAF4Q9BUZ4 470 aaPredicted RBP9.52□□□□□ -0.89
UBE4B-210ENST00000488228 ABHD6Q9BV23 337 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 ADI1Q9BV57 179 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 VCXQ9H320 206 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 POFUT1Q9H488 388 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms