RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 NPAP1Q9NZP6 1156 aa12.23□□□□□ -0.45
NUP188-207ENST00000487952 CRNNQ9UBG3 495 aaPredicted RBP12.23□□□□□ -0.45
NUP188-207ENST00000487952 KCNN3Q9UGI6 736 aa12.23□□□□□ -0.45
NUP188-207ENST00000487952 BLOC1S6Q9UL45 172 aa12.23□□□□□ -0.45
NUP188-207ENST00000487952 TPRKBQ9Y3C4 175 aa12.23□□□□□ -0.45
NUP188-207ENST00000487952 HCFC1P51610 2035 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 IGHV1-18A0A0C4DH31 117 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 DAPL1A0PJW8 107 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 OR6C6A6NF89 314 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 SLC1A7O00341 560 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 XPNPEP2O43895 674 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 IGLV1-44P01699 117 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 CRYAAP02489 173 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 CELA3BP08861 270 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 H2BFMP0C1H6 154 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 PSKH1P11801 424 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 ZNF14P17017 642 aaPredicted RBP12.22□□□□□ -0.45
NUP188-207ENST00000487952 CCNOP22674 350 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 APEX1P27695 318 aaKnown RBP12.22□□□□□ -0.45
NUP188-207ENST00000487952 SLC15A1P46059 708 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 NR1H2P55055 460 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 CXCR4P61073 352 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 SPATC1Q76KD6 591 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 KRT77Q7Z794 578 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.22□□□□□ -0.45
NUP188-207ENST00000487952 STX19Q8N4C7 294 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 ACBD7Q8N6N7 88 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 ZNF540Q8NDQ6 660 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 SLC30A7Q8NEW0 376 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 IL17RDQ8NFM7 739 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 SPTSSAQ969W0 71 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 MAP6Q96JE9 813 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 COQ7Q99807 217 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 ATF6BQ99941 703 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 MRPS18AQ9NVS2 196 aaKnown RBP12.22□□□□□ -0.45
NUP188-207ENST00000487952 CHCHD3Q9NX63 227 aaKnown RBP12.22□□□□□ -0.45
NUP188-207ENST00000487952 CNOT2Q9NZN8 540 aaKnown RBP12.22□□□□□ -0.45
NUP188-207ENST00000487952 ATPIF1Q9UII2 106 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 IKZF2Q9UKS7 526 aa12.22□□□□□ -0.45
NUP188-207ENST00000487952 EXOGQ9Y2C4 368 aaKnown RBP12.22□□□□□ -0.45
NUP188-207ENST00000487952 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.21□□□□□ -0.45
NUP188-207ENST00000487952 SYNGR3O43761 229 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 CD3EP07766 207 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 CCDC159P0C7I6 412 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 ALOX5APP20292 161 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 CD40P25942 277 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 STOMP27105 288 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 DCKP27707 260 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 HSD11B1P28845 292 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 GRB2P62993 217 aaKnown RBP12.21□□□□□ -0.45
NUP188-207ENST00000487952 RBM48Q5RL73 367 aaKnown RBP12.21□□□□□ -0.45
NUP188-207ENST00000487952 LAIR2Q6ISS4 152 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 ZNF322Q6U7Q0 402 aaPredicted RBP12.21□□□□□ -0.45
NUP188-207ENST00000487952 SEZ6L2Q6UXD5 910 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 AHSA2Q719I0 299 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 OR52I1Q8NGK6 324 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 ST7LQ8TDW4 575 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 PIK3IP1Q96FE7 263 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 PLPPR2Q96GM1 343 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 RADILQ96JH8 1075 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 TTTY10Q9BZA0 68 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 FGF20Q9NP95 211 aaPredicted RBP12.21□□□□□ -0.45
NUP188-207ENST00000487952 INPP5EQ9NRR6 644 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 PLEKHB1Q9UF11 243 aaPredicted RBP12.21□□□□□ -0.45
NUP188-207ENST00000487952 PSORS1C1Q9UIG5 152 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 COPS3Q9UNS2 423 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 KLHDC2Q9Y2U9 406 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 LRRC42Q9Y546 428 aa12.21□□□□□ -0.45
NUP188-207ENST00000487952 A0A1W2PQL4 384 aaPredicted RBP12.2□□□□□ -0.46
NUP188-207ENST00000487952 C5orf49A4QMS7 147 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 PTGES3LE9PB15 166 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 GOSR1O95249 250 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 PIPP12273 146 aaPredicted RBP12.2□□□□□ -0.46
NUP188-207ENST00000487952 MYL12AP19105 171 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 TPTEP56180 551 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 GALK2Q01415 458 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 NAAAQ02083 359 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 BSPH1Q075Z2 132 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 ST3GAL4Q11206 333 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 NCMAPQ5T1S8 102 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 ARL9Q6T311 187 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 FAM220AQ7Z4H9 259 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 ZNF584Q8IVC4 421 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
NUP188-207ENST00000487952 ZNF283Q8N7M2 679 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 ACBD4Q8NC06 268 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 CPEB3Q8NE35 698 aaKnown RBP12.2□□□□□ -0.46
NUP188-207ENST00000487952 OR10S1Q8NGN2 331 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 SNX33Q8WV41 574 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 RNF133Q8WVZ7 376 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 IPCEF1Q8WWN9 437 aaPredicted RBP12.2□□□□□ -0.46
NUP188-207ENST00000487952 GGHQ92820 318 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 MYDGFQ969H8 173 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 TMEM80Q96HE8 168 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 ZNF75AQ96N20 296 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 PSMG3-AS1Q96PY0 264 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 AMELYQ99218 206 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 MROQ9BYG7 248 aa12.2□□□□□ -0.46
NUP188-207ENST00000487952 DDX28Q9NUL7 540 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms