RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ZNF555Q8NEP9 628 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 SYNPRQ8TBG9 265 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 RAB40AQ8WXH6 277 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 CIDECQ96AQ7 238 aaPredicted RBP9.71□□□□□ -0.86
TRIM56-204ENST00000487252 DDIT4LQ96D03 193 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 SLC35A5Q9BS91 424 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 MMP28Q9H239 520 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 ADPRHL2Q9NX46 363 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 DCAF16Q9NXF7 216 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 RSL24D1Q9UHA3 163 aaKnown RBP9.71□□□□□ -0.86
TRIM56-204ENST00000487252 RPUSD1Q9UJJ7 312 aaKnown RBP9.71□□□□□ -0.86
TRIM56-204ENST00000487252 HSPE1-MOB4S4R3N1 261 aa9.71□□□□□ -0.86
TRIM56-204ENST00000487252 TMEM72A0PK05 275 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 PDPK1O15530 556 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 BCAS1O75363 584 aaPredicted RBP9.7□□□□□ -0.86
TRIM56-204ENST00000487252 E2F6O75461 281 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 CYP7B1O75881 506 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 VAMP5O95183 116 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 KRT75O95678 551 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 CSTAP01040 98 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 IGHV1-46P01743 117 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 IGHV3-13P01766 116 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 MT-ND5P03915 603 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 ETS2P15036 469 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 IGLL1P15814 213 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 CPT2P23786 658 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 CRHBPP24387 322 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 CAPZA2P47755 286 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 MAP2K6P52564 334 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 EFNB2P52799 333 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 ISL1P61371 349 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 ESRRGP62508 458 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 SELENOWP63302 87 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 HNRNPA0Q13151 305 aaKnown RBP9.7□□□□□ -0.86
TRIM56-204ENST00000487252 DYNC1I2Q13409 638 aaKnown RBP9.7□□□□□ -0.86
TRIM56-204ENST00000487252 LASP1Q14847 261 aaKnown RBP9.7□□□□□ -0.86
TRIM56-204ENST00000487252 CEACAM16Q2WEN9 425 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 COX20Q5RI15 118 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 C6orf141Q5SZD1 244 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 DHRS7BQ6IAN0 325 aaPredicted RBP9.7□□□□□ -0.86
TRIM56-204ENST00000487252 FRRS1Q6ZNA5 592 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 SZRD1Q7Z422 152 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 GPR141Q7Z602 305 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 VTCN1Q7Z7D3 282 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 ERI1Q8IV48 349 aaKnown RBP9.7□□□□□ -0.86
TRIM56-204ENST00000487252 PSMA8Q8TAA3 256 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 OR5P2Q8WZ92 322 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 ZNF566Q969W8 418 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 NMD3Q96D46 503 aaKnown RBP9.7□□□□□ -0.86
TRIM56-204ENST00000487252 EPYCQ99645 322 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 OSGIN1Q9UJX0 560 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 FAF1Q9UNN5 650 aaPredicted RBP9.7□□□□□ -0.86
TRIM56-204ENST00000487252 RCE1Q9Y256 329 aa9.7□□□□□ -0.86
TRIM56-204ENST00000487252 TMED7-TICAM2A0A0A6YYA0 188 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 LOC100130705A0A1B0GUX0 176 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 M0QX08 132 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 UGT2B17O75795 530 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 WNT2P09544 360 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 OR8G3PP0DMU2 310 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 ETFAP13804 333 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 CCNA2P20248 432 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 PRKACGP22612 351 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 DCKP27707 260 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 TGFBR2P37173 567 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 HTR3AP46098 478 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 DAPP51397 102 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 ZNF81P51508 661 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 MMP15P51511 669 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 PCBP3P57721 371 aaKnown RBP9.69□□□□□ -0.86
TRIM56-204ENST00000487252 PLAURQ03405 335 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 PIGFQ07326 219 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 CD47Q08722 323 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 EGFEM1PQ0D2K5 195 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 SPRNQ5BIV9 151 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 TMEM225Q6GV28 225 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 SLC35E4Q6ICL7 350 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 C11orf44Q8N8P7 122 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 CPEB3Q8NE35 698 aaKnown RBP9.69□□□□□ -0.86
TRIM56-204ENST00000487252 PIK3C3Q8NEB9 887 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 OR4C15Q8NGM1 316 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 ZNF563Q8TA94 476 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 ZNF420Q8TAQ5 688 aaPredicted RBP9.69□□□□□ -0.86
TRIM56-204ENST00000487252 ZNF519Q8TB69 540 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 RBMXL1Q96E39 390 aaKnown RBP9.69□□□□□ -0.86
TRIM56-204ENST00000487252 SDF2Q99470 211 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 PITX2Q99697 317 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 STARD9Q9P2P6 4700 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 BAG5Q9UL15 447 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 FOXJ3Q9UPW0 622 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 TMED7Q9Y3B3 224 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 ORC6Q9Y5N6 252 aa9.69□□□□□ -0.86
TRIM56-204ENST00000487252 NUP214P35658 2090 aaPredicted RBP9.68□□□□□ -0.86
TRIM56-204ENST00000487252 HUWE1Q7Z6Z7 4374 aaKnown RBP9.68□□□□□ -0.86
TRIM56-204ENST00000487252 ADARB2-AS1A8MUL3 147 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 RNASEK-C17orf49H0YIS7 233 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 MITFO75030 526 aaPredicted RBP9.68□□□□□ -0.86
TRIM56-204ENST00000487252 TRMUO75648 421 aaKnown RBP9.68□□□□□ -0.86
TRIM56-204ENST00000487252 CCDC159P0C7I6 412 aa9.68□□□□□ -0.86
TRIM56-204ENST00000487252 POLR2IP36954 125 aaKnown RBP9.68□□□□□ -0.86
TRIM56-204ENST00000487252 CRATP43155 626 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms