RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 KCNN2Q9H2S1 579 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 MOV10Q9HCE1 1003 aaKnown RBP8.34□□□□□ -1.07
MCF2L-227ENST00000486806 ERVK13-1Q9NX77 482 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 ERVK-18Q9QC07 812 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 EXOSC1Q9Y3B2 195 aaKnown RBP8.34□□□□□ -1.07
MCF2L-227ENST00000486806 TIMM10BQ9Y5J6 103 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 FREM1Q5H8C1 2179 aa8.34□□□□□ -1.08
MCF2L-227ENST00000486806 TMEM129A0AVI4 362 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 DAPL1A0PJW8 107 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF878C9JN71 531 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 SGCEO43556 437 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 DOK2O60496 412 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 AGFG2O95081 481 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 MT-ND2P03891 347 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 THBDP07204 575 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 COX5BP10606 129 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 CBR1P16152 277 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF14P17017 642 aaPredicted RBP8.33□□□□□ -1.08
MCF2L-227ENST00000486806 IGFBP2P18065 325 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 CRYGSP22914 178 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 PAX7P23759 505 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 OTX1P32242 354 aaPredicted RBP8.33□□□□□ -1.08
MCF2L-227ENST00000486806 CAPZA2P47755 286 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ETV1P50549 477 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 CDH15P55291 814 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ACTA2P62736 377 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 RAB1AP62820 205 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ACTG2P63267 376 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 DOC2BQ14184 412 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 PPA1Q15181 289 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 TBCEQ15813 527 aaPredicted RBP8.33□□□□□ -1.08
MCF2L-227ENST00000486806 C3orf36Q3SXR2 165 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 PABPC1L2AQ5JQF8 200 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ELFN2Q5R3F8 820 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF774Q6NX45 483 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 TMEM53Q6P2H8 277 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF773Q6PK81 442 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 DEGS2Q6QHC5 323 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 MYPOPQ86VE0 399 aaPredicted RBP8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ACBD4Q8NC06 268 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF485Q8NCK3 441 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 CPEB3Q8NE35 698 aaKnown RBP8.33□□□□□ -1.08
MCF2L-227ENST00000486806 AKR7LQ8NHP1 331 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 HSD17B8Q92506 261 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 COQ7Q99807 217 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ATF6BQ99941 703 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ALG8Q9BVK2 526 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 TTTY10Q9BZA0 68 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 PLEK2Q9NYT0 353 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 NPAP1Q9NZP6 1156 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 CLEC2DQ9UHP7 191 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 MRM2Q9UI43 246 aaKnown RBP8.33□□□□□ -1.08
MCF2L-227ENST00000486806 FBXL3Q9UKT7 428 aa8.33□□□□□ -1.08
MCF2L-227ENST00000486806 LSM2Q9Y333 95 aaKnown RBP8.33□□□□□ -1.08
MCF2L-227ENST00000486806 ADGRG4Q8IZF6 3080 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 IGHV1-18A0A0C4DH31 117 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 TRIM64CA6NLI5 447 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 C19orf84I3L1E1 186 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 SULT1C4O75897 302 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 PTHP01270 115 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 SERPINA5P05154 406 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 CELA3BP08861 270 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 SMIM18P0DKX4 95 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 MYL12AP19105 171 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 PCMT1P22061 227 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 EEF1B2P24534 225 aaKnown RBP8.32□□□□□ -1.08
MCF2L-227ENST00000486806 HTR5AP47898 357 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 RAB39AQ14964 217 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 RSPO1Q2MKA7 263 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-227ENST00000486806 TMEM154Q6P9G4 183 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 KCTD18Q6PI47 426 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-227ENST00000486806 LRRN1Q6UXK5 716 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 LHFPL3Q86UP9 236 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 EGFL6Q8IUX8 553 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF679Q8IYX0 411 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 SPARTQ8N0X7 666 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 SYS1Q8N2H4 156 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 OR52N1Q8NH53 320 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 OR1F12Q8NHA8 337 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 SSC4DQ8WTU2 575 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 THEM6Q8WUY1 208 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 RNF166Q96A37 237 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-227ENST00000486806 MUCL1Q96DR8 90 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 MS4A3Q96HJ5 214 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 WFIKKN1Q96NZ8 548 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 RNF121Q9H920 327 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 ACOXLQ9NUZ1 547 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 SLCO1C1Q9NYB5 712 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 CAB39Q9Y376 341 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-227ENST00000486806 LRP12Q9Y561 859 aa8.32□□□□□ -1.08
MCF2L-227ENST00000486806 KLF2Q9Y5W3 355 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-227ENST00000486806 LOC100509620A0A075B734 347 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 METTL15A6NJ78 407 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 PSMD9O00233 223 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 MAGEB4O15481 346 aaPredicted RBP8.31□□□□□ -1.08
MCF2L-227ENST00000486806 ICMTO60725 284 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF254O75437 659 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 SRSF10O75494 262 aaKnown RBP8.31□□□□□ -1.08
MCF2L-227ENST00000486806 DBHP09172 617 aa8.31□□□□□ -1.08
MCF2L-227ENST00000486806 CECR9P0C854 216 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms