RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 HUS1O60921 280 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 FKBP6O75344 327 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 CLDN11O75508 207 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 RP2O75695 350 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 CTDNEP1O95476 244 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 SERPINE2P07093 398 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 RHOXF2BP0C7M4 288 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 DUX4L2P0CJ85 424 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 DUX4L3P0CJ86 424 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 DUX4L5P0CJ88 424 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 DUX4L6P0CJ89 424 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 DUX4L7P0CJ90 424 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 IGHV1-8P0DP01 117 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 MYL2P10916 166 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 MUC1P15941 1255 aaPredicted RBP1.6□□□□□ -2.15
GCFC2-209ENST00000486016 BCKDHBP21953 392 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 F2RP25116 425 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 GTF2E2P29084 291 aaKnown RBP1.6□□□□□ -2.15
GCFC2-209ENST00000486016 CRISP1P54107 249 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 EIF3EP60228 445 aaKnown RBP1.6□□□□□ -2.15
GCFC2-209ENST00000486016 STXBP1P61764 594 aaKnown RBP1.6□□□□□ -2.15
GCFC2-209ENST00000486016 ARG2P78540 354 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 SP4Q02446 784 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 MERTKQ12866 999 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 PON2Q15165 354 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 RGNQ15493 299 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 THEM4Q5T1C6 240 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 TMEM220Q6QAJ8 160 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 BRD3OSQ6XYD6 125 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 MBOAT1Q6ZNC8 495 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 CMC1Q7Z7K0 106 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 SCD5Q86SK9 330 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 LUZP2Q86TE4 346 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 TMEM150AQ86TG1 271 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 CCDC148Q8NFR7 591 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 NUBPLQ8TB37 319 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 ABHD3Q8WU67 409 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 EEF1AKMT3Q96AZ1 226 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 TM4SF18Q96CE8 201 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 ECHDC3Q96DC8 303 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 SEH1LQ96EE3 360 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 PDXPQ96GD0 296 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 DNAJC1Q96KC8 554 aaKnown RBP1.6□□□□□ -2.15
GCFC2-209ENST00000486016 NDFIP1Q9BT67 221 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 ULBP2Q9BZM5 246 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 SAV1Q9H4B6 383 aaPredicted RBP1.6□□□□□ -2.15
GCFC2-209ENST00000486016 VPS37BQ9H9H4 285 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 C12orf10Q9HB07 376 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 TMEM165Q9HC07 324 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 TMEM9BQ9NQ34 198 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 MTCH1Q9NZJ7 389 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 CCDC59Q9P031 241 aaKnown RBP1.6□□□□□ -2.15
GCFC2-209ENST00000486016 GCNT4Q9P109 453 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 DUX4Q9UBX2 424 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 SLC17A4Q9Y2C5 497 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 CAMTA1Q9Y6Y1 1673 aa1.6□□□□□ -2.15
GCFC2-209ENST00000486016 IGHV5-10-1A0A0J9YXX1 117 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 SMKR1H3BMG3 65 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 SCAMP2O15127 329 aaKnown RBP1.59□□□□□ -2.15
GCFC2-209ENST00000486016 SLC25A14O95258 325 aaPredicted RBP1.59□□□□□ -2.15
GCFC2-209ENST00000486016 TPM2P07951 284 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 CISD3P0C7P0 127 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 GGT1P19440 569 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 EIF2S2P20042 333 aaKnown RBP1.59□□□□□ -2.15
GCFC2-209ENST00000486016 UQCRFS1P47985 274 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 MRPL19P49406 292 aaKnown RBP1.59□□□□□ -2.15
GCFC2-209ENST00000486016 ESRRGP62508 458 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 SYCNQ0VAF6 134 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 RCAN2Q14206 197 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 STK11Q15831 433 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 HSDL1Q3SXM5 330 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 UBE2UQ5VVX9 321 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 METTL21CQ5VZV1 264 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 BZW1Q7L1Q6 419 aaKnown RBP1.59□□□□□ -2.15
GCFC2-209ENST00000486016 EIF3MQ7L2H7 374 aaKnown RBP1.59□□□□□ -2.15
GCFC2-209ENST00000486016 PRSS58Q8IYP2 241 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 OR10AD1Q8NGE0 317 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 LYPD6BQ8NI32 183 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 MRGPRFQ96AM1 343 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 GALNT14Q96FL9 552 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 LINC00477Q96M19 166 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 PRRC1Q96M27 445 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 COL21A1Q96P44 957 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 CDX2Q99626 313 aaPredicted RBP1.59□□□□□ -2.15
GCFC2-209ENST00000486016 MICU1Q9BPX6 476 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 SYNDIG1Q9H7V2 258 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 UBE2ZQ9H832 354 aaPredicted RBP1.59□□□□□ -2.15
GCFC2-209ENST00000486016 ZNF430Q9H8G1 570 aaPredicted RBP1.59□□□□□ -2.15
GCFC2-209ENST00000486016 RETNQ9HD89 108 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 FAM49BQ9NUQ9 324 aa1.59□□□□□ -2.15
GCFC2-209ENST00000486016 LYARQ9NX58 379 aaKnown RBP1.59□□□□□ -2.15
GCFC2-209ENST00000486016 GPATCH8Q9UKJ3 1502 aaKnown RBP1.59□□□□□ -2.16
GCFC2-209ENST00000486016 IGSF9BQ9UPX0 1349 aa1.59□□□□□ -2.16
GCFC2-209ENST00000486016 INSRP06213 1382 aa1.59□□□□□ -2.16
GCFC2-209ENST00000486016 FBN3Q75N90 2809 aa1.58□□□□□ -2.16
GCFC2-209ENST00000486016 PLA2R1Q13018 1463 aa1.58□□□□□ -2.16
GCFC2-209ENST00000486016 IGLV1-50A0A075B6I6 118 aa1.58□□□□□ -2.16
GCFC2-209ENST00000486016 SERTM2A0A1B0GWG4 89 aa1.58□□□□□ -2.16
GCFC2-209ENST00000486016 TEX46H3BTG2 121 aa1.58□□□□□ -2.16
GCFC2-209ENST00000486016 K7EMT4 169 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms