RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 PNRC2Q9NPJ4 139 aaKnown RBP13.66□□□□□ -0.22
UPF3A-208ENST00000484246 TUBG2Q9NRH3 451 aa13.66□□□□□ -0.22
UPF3A-208ENST00000484246 EIF3KQ9UBQ5 218 aaKnown RBP13.66□□□□□ -0.22
UPF3A-208ENST00000484246 GDF2Q9UK05 429 aaPredicted RBP13.66□□□□□ -0.22
UPF3A-208ENST00000484246 DSCAMO60469 2012 aa13.66□□□□□ -0.22
UPF3A-208ENST00000484246 ZAR1LA6NP61 321 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 FAM171A2A8MVW0 826 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 PRODHO43272 600 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 FAM157BP0CG42 384 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 IGFBP5P24593 272 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 FMO3P31513 532 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 DBPQ10586 325 aaPredicted RBP13.65□□□□□ -0.22
UPF3A-208ENST00000484246 ECH1Q13011 328 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 SLX4IPQ5VYV7 408 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 OTPQ5XKR4 325 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 ARL9Q6T311 187 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 CFAP77Q6ZQR2 320 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 ZNF101Q8IZC7 436 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 PTP4A1Q93096 173 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 CIB1Q99828 191 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 RBM4BQ9BQ04 359 aaKnown RBP13.65□□□□□ -0.22
UPF3A-208ENST00000484246 HCAR1Q9BXC0 346 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 ELOVL3Q9HB03 270 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 S100A14Q9HCY8 104 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 HINT3Q9NQE9 182 aaKnown RBP13.65□□□□□ -0.22
UPF3A-208ENST00000484246 DLL4Q9NR61 685 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 DDX28Q9NUL7 540 aaKnown RBP13.65□□□□□ -0.22
UPF3A-208ENST00000484246 USE1Q9NZ43 259 aa13.65□□□□□ -0.22
UPF3A-208ENST00000484246 C2CD3Q4AC94 2353 aa13.64□□□□□ -0.23
UPF3A-208ENST00000484246 GLCEO94923 617 aa13.64□□□□□ -0.23
UPF3A-208ENST00000484246 HLA-DQA2P01906 255 aa13.64□□□□□ -0.23
UPF3A-208ENST00000484246 CLUP10909 449 aa13.64□□□□□ -0.23
UPF3A-208ENST00000484246 ZNF823P16415 610 aa13.64□□□□□ -0.23
UPF3A-208ENST00000484246 RGS6P49758 472 aa13.64□□□□□ -0.23
UPF3A-208ENST00000484246 ENTPD1P49961 510 aa13.64□□□□□ -0.23
UPF3A-208ENST00000484246 EFNA4P52798 201 aa13.64□□□□□ -0.23
UPF3A-208ENST00000484246 PTGES3Q15185 160 aaKnown RBP13.64□□□□□ -0.23
UPF3A-208ENST00000484246 SLC35D3Q5M8T2 416 aa13.64□□□□□ -0.23
UPF3A-208ENST00000484246 MBNL2Q5VZF2 373 aaKnown RBP13.64□□□□□ -0.23
UPF3A-208ENST00000484246 C12orf73Q69YU5 71 aa13.64□□□□□ -0.23
UPF3A-208ENST00000484246 MARS2Q96GW9 593 aaKnown RBP13.64□□□□□ -0.23
UPF3A-208ENST00000484246 C4orf45Q96LM5 186 aa13.64□□□□□ -0.23
UPF3A-208ENST00000484246 SEMA6AQ9H2E6 1030 aa13.64□□□□□ -0.23
UPF3A-208ENST00000484246 SAC3D1A6NKF1 404 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 FAM183AA6NL82 134 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 PRR23D1E9PI22 279 aaPredicted RBP13.63□□□□□ -0.23
UPF3A-208ENST00000484246 M0R233 179 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 MITFO75030 526 aaPredicted RBP13.63□□□□□ -0.23
UPF3A-208ENST00000484246 NDUFS7O75251 213 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 ABHD16AO95870 558 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 IGHV3-13P01766 116 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 ALPLP05186 524 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 GYPBP06028 91 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 CSF3P09919 207 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 PRR23D2P0DMB1 279 aaPredicted RBP13.63□□□□□ -0.23
UPF3A-208ENST00000484246 FOSL1P15407 271 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 CCNOP22674 350 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 SLC2A5P22732 501 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 OTX1P32242 354 aaPredicted RBP13.63□□□□□ -0.23
UPF3A-208ENST00000484246 KLF3P57682 345 aaPredicted RBP13.63□□□□□ -0.23
UPF3A-208ENST00000484246 EFNB1P98172 346 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 TMEM236Q5W0B7 351 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 PLBD1Q6P4A8 553 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 CORO6Q6QEF8 472 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 LYPD4Q6UWN0 246 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 COLCA1Q6ZS62 124 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.63□□□□□ -0.23
UPF3A-208ENST00000484246 PQLC1Q8N2U9 271 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 ICA1LQ8NDH6 482 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 OR51L1Q8NGJ5 315 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 OR1J1Q8NGS3 322 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 OR6K6Q8NGW6 343 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 OR2AJ1Q8NGZ0 328 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 SYNPRQ8TBG9 265 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 MAP6Q96JE9 813 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 COG8Q96MW5 612 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 SORCS2Q96PQ0 1159 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 ATF6BQ99941 703 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 CDADC1Q9BWV3 514 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 MYOZ1Q9NP98 299 aaPredicted RBP13.63□□□□□ -0.23
UPF3A-208ENST00000484246 SLCO1C1Q9NYB5 712 aa13.63□□□□□ -0.23
UPF3A-208ENST00000484246 TVP23AA6NH52 213 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 F12P00748 615 aaPredicted RBP13.62□□□□□ -0.23
UPF3A-208ENST00000484246 LCKP06239 509 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 PSKH1P11801 424 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 EPHA2P29317 976 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 GSTT1P30711 240 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 DSCR9P59020 149 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 SELENOVP59797 346 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 ERVS71-1P61550 626 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 PPP1CBP62140 327 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 ZSCAN26Q16670 478 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 CLEC12BQ2HXU8 276 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 ZNF718Q3SXZ3 478 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 LRP11Q86VZ4 500 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 LINC00346Q8IVM7 164 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 TIGD4Q8IY51 512 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 ZNF511Q8NB15 262 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 OR10S1Q8NGN2 331 aa13.62□□□□□ -0.23
UPF3A-208ENST00000484246 ABHD4Q8TB40 342 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms