RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 FAM122BQ7Z309 247 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 TSEN54Q7Z6J9 526 aaKnown RBP13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 FAM156AQ8NDB6 213 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 SLC7A13Q8TCU3 470 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 ITLN1Q8WWA0 313 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 PTP4A1Q93096 173 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 FAM162AQ96A26 154 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 HAVCR1Q96D42 359 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 HOPXQ9BPY8 73 aaPredicted RBP13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 SYT4Q9H2B2 425 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 EFCAB1Q9HAE3 211 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 ESM1Q9NQ30 184 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 ASH2LQ9UBL3 628 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 IL20RAQ9UHF4 553 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 PPP1R3CQ9UQK1 317 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 TMEM5Q9Y2B1 443 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 ENPP4Q9Y6X5 453 aa13.98□□□□□ -0.17
RAB11FIP3-209ENST00000483002 SOCS2O14508 198 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 IMPA2O14732 288 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 PTP4A3O75365 173 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 KHDRBS3O75525 346 aaKnown RBP13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 NDUFB2O95178 105 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 ERFP50548 548 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 AQP6Q13520 282 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 KRR1Q13601 381 aaKnown RBP13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 LRRC28Q86X40 367 aaPredicted RBP13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 GLB1L2Q8IW92 636 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 OR5AS1Q8N127 324 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 SPICQ8N5J4 248 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 ZNF283Q8N7M2 679 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 ZDHHC22Q8N966 263 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 ATG16L2Q8NAA4 619 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 OR1F12Q8NHA8 337 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 COG8Q96MW5 612 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 ANKRD19PQ9H560 264 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 PATZ1Q9HBE1 687 aaKnown RBP13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 DDX28Q9NUL7 540 aaKnown RBP13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 IL19Q9UHD0 177 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 SIGLEC7Q9Y286 467 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 FAM32AQ9Y421 112 aaKnown RBP13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 PPIAL4AQ9Y536 164 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 IER3IP1Q9Y5U9 82 aa13.97□□□□□ -0.17
RAB11FIP3-209ENST00000483002 PPIAL4EA0A075B759 164 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 PPIAL4CA0A0B4J2A2 164 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 PPIAL4DF5H284 164 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 TRAPPC2LH3BP13 241 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 RER1O15258 196 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 SURF4O15260 269 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 FSHBP01225 129 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 H1F0P07305 194 aaKnown RBP13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 DBHP09172 617 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 PPIAL4FP0DN26 164 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 SDHAP31040 664 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 SLC6A9P48067 706 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 CENPAP49450 140 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 SEC61A1P61619 476 aaKnown RBP13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 LSM6P62312 80 aaKnown RBP13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 BTG1P62324 171 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 HLXQ14774 488 aaPredicted RBP13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 ZMYND11Q15326 602 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 TMEM155Q4W5P6 130 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 CCDC92Q53HC0 331 aaPredicted RBP13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 FGD3Q5JSP0 725 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 GPR139Q6DWJ6 353 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 RBMS3Q6XE24 437 aaKnown RBP13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 DEFB108BQ8NET1 73 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 DVL3Q92997 716 aaPredicted RBP13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 OR2V2Q96R30 315 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 KCTD14Q9BQ13 255 aaPredicted RBP13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 NUAK2Q9H093 628 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 NTN4Q9HB63 628 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 NRIP3Q9NQ35 241 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 AUP1Q9Y679 476 aa13.96□□□□□ -0.17
RAB11FIP3-209ENST00000483002 A0A1W2PRQ8 180 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 OR6C6A6NF89 314 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 SPRY1O43609 319 aaPredicted RBP13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 CCDC22O60826 627 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 RAC2P15153 192 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 NUDT2P50583 147 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 UBA52P62987 128 aaKnown RBP13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 ZNF154Q13106 437 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 DGCR6Q14129 220 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 ARMCX4Q5H9R4 360 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 C8orf82Q6P1X6 216 aaPredicted RBP13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 SIGLEC11Q96RL6 698 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 PTTG3PQ9NZH4 202 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 VSX1Q9NZR4 365 aaPredicted RBP13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 NDUFAF4Q9P032 175 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 RPS6KA6Q9UK32 745 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 AURKCQ9UQB9 309 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 POLR1DQ9Y2S0 133 aa13.95□□□□□ -0.18
RAB11FIP3-209ENST00000483002 NDUFAB1O14561 156 aa13.94□□□□□ -0.18
RAB11FIP3-209ENST00000483002 DIRAS1O95057 198 aa13.94□□□□□ -0.18
RAB11FIP3-209ENST00000483002 ZNF205O95201 554 aa13.94□□□□□ -0.18
RAB11FIP3-209ENST00000483002 GPANK1O95872 356 aa13.94□□□□□ -0.18
RAB11FIP3-209ENST00000483002 EGR1P18146 543 aa13.94□□□□□ -0.18
RAB11FIP3-209ENST00000483002 MDH2P40926 338 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP3-209ENST00000483002 CDKN2AP42771 156 aaKnown RBP13.94□□□□□ -0.18
RAB11FIP3-209ENST00000483002 OMPP47874 163 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms